Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2913 ATGGCCGCCGCTATTCTCTTCTCCGCCGCGATTCTGGCGGCGCTAGCGGCGGTTGTGTTCGGTTCTCCGGTGACTCTGACGTTGCAAAGAGCCTTTCCGTCGAACCACGGGATGGACTTGAGTCAGCTCAGAGCATGGGACTCCGCCAGACATCGAAGGATGTTGCAGACAACTAACTATGTTGTTGATTTCCCTGTTAAGGGCACCTTCGATCCCTCTCAAGTCGGGCTTTACTATACAAAGGTGAGGTTGGGTACTCCTCCAAGGGAGTTTCATGTGCAGATTGACACTGGAAGTGATGTTCTATGGGTTAGTTGTGGTTCCTGCAATGGTTGCCCTGAGACTAGTGGTCTCCAAATTCAGCTCAATTATTTCGACCCGGGGAGCTCATCAACATCTTCATTCATCTCATGCTTGGACCAAAGGTGCAGGAATGGCGTGCAGTCTTCAGATGCCAGCTGTTCCGCTCAGAGCAACCAGTGCAGCTACACATTCCAGTATGGAGATGGAAGTGGGACATCAGGCTATTACGTGTCGGACTTGATGCATTTTGCTAGTATTTTCGAGGGATCCCTGACAACAAATTCTTCAACTCCTATAGTTTTTGGTTGTAGCAACCTGCAGAGTGGGGAGTTGACTAAGTCTGACAGAGCAATTGATGGAATATTTGGATTTGGGCAGCAGGAGATGTCTGTCATCTCCCAGCTCTCGTCACAAGGAATAGCGCCAAAAGTGTTCTCCCATTGCCTGAAGGGAGATAACAGTGGTGGTGGCATATTGGTTCTTGGTGAGATTGTGGAGCCGAACATTATTTTTAGTCCACTTGTTCCATCACAGCCTCATTACAATCTAAATCTGCAGAGCATCTCTATCAATGGTCAAATGCTGCCAATTGATTCTTCAGTTTTTGCTACATCAAGCAACAGAGGTACCATTATAGATTCTGGAACAACTTTGGCGTACCTCGCAGAAGAGGCTTACCATCCATTTGTTAATGCGATTACATCTGCTATTCCACAATCCGTACGCACAGTTCTTTCCAAGGGAAATCAATGTTTCTTAATAACCTCCAGTGTTGATGAGATTTTTCCTCAAGTAAGTCTGAACTTTGCTGGCGGTGCATCTCTGGTTTTAAGGCCACAGGACTACCTTATACAGCAGAATCCCATTGTTGATGGAGCAGTGTGGTGTATGGGCTTTCAGAAAATCCCAGGACAAGGTGTAACAATTCTAGGAGACCTTGTATTAAAAGACAAAATTTTCATCTATGACCTTGCTAGTCAACGCATTGGATGGGCTGATTATGACTGTTCATTATCGGTTAATGTCACGGCATCAACTGGTACCGGAAGAAGTGAATTTGTGAATGCAGGAGAGTTAAGTGGAAGCACTTGTTTAAGCTATGGACCTCACAAGTTGATCAAATCTTGGGTCCTGGCTTTCTTCATCCACACGGCACTTATTATATACAGCATTGTAGTTTTGTAG 1488 0.457 MAAAILFSAAILAALAAVVFGSPVTLTLQRAFPSNHGMDLSQLRAWDSARHRRMLQTTNYVVDFPVKGTFDPSQVGLYYTKVRLGTPPREFHVQIDTGSDVLWVSCGSCNGCPETSGLQIQLNYFDPGSSSTSSFISCLDQRCRNGVQSSDASCSAQSNQCSYTFQYGDGSGTSGYYVSDLMHFASIFEGSLTTNSSTPIVFGCSNLQSGELTKSDRAIDGIFGFGQQEMSVISQLSSQGIAPKVFSHCLKGDNSGGGILVLGEIVEPNIIFSPLVPSQPHYNLNLQSISINGQMLPIDSSVFATSSNRGTIIDSGTTLAYLAEEAYHPFVNAITSAIPQSVRTVLSKGNQCFLITSSVDEIFPQVSLNFAGGASLVLRPQDYLIQQNPIVDGAVWCMGFQKIPGQGVTILGDLVLKDKIFIYDLASQRIGWADYDCSLSVNVTASTGTGRSEFVNAGELSGSTCLSYGPHKLIKSWVLAFFIHTALIIYSIVVL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2913 495 CDD pepsin_A_like_plant 78 437 IPR034161 -
Aev04g2913 495 ProSiteProfiles Peptidase family A1 domain profile. 78 433 IPR033121 -
Aev04g2913 495 Pfam Xylanase inhibitor C-terminal 281 433 IPR032799 -
Aev04g2913 495 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 454 - -
Aev04g2913 495 Pfam Xylanase inhibitor N-terminal 78 263 IPR032861 -
Aev04g2913 495 Gene3D Acid Proteases 265 445 IPR021109 -
Aev04g2913 495 PANTHER ASPARTYL PROTEASES 10 454 IPR001461 GO:0004190|GO:0006508
Aev04g2913 495 Gene3D Acid Proteases 53 264 IPR021109 -
Aev04g2913 495 SUPERFAMILY Acid proteases 75 440 IPR021109 -
Aev04g2913 495 PRINTS Pepsin (A1) aspartic protease family signature 409 424 IPR001461 GO:0004190|GO:0006508
Aev04g2913 495 PRINTS Pepsin (A1) aspartic protease family signature 311 322 IPR001461 GO:0004190|GO:0006508
Aev04g2913 495 PRINTS Pepsin (A1) aspartic protease family signature 84 104 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2913 Aev-Chr4 28913395 28918231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2913 48 438 Miscellaneous Gene Families AT1G44130 26.895 5.60e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2913 - K00924 gmx:100811632 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1970 10 21010997 21014479 Aev04g2913 04 28913395 28918231 PCT