Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1947 ATGCCATCATCAGCAGCAGCACTTCCTTCTTTCCTCCACAAGGCTCCTCCTCTCCTCTCTCTTTTCTTCTTCTTCTTCTTCTCAATCATGATTTGTAGTAGCATTGCTCAGGGTCCACCTTCACCTGGCTACTACCCTAGTTCCAAGATTAGTCCTGTTAGCTTTGATCAAGGATTCAGAAACCTTTGGGGACCTCAGCATCAGAAATTTGACCAAGGCACATTAACAATCTGGCTTGACTCTTACTCAGGGAGTGGGTTCAAGTCACTTCATTCGTATCGATCCGGATACTTTAGTGCTGCCATTAAGCTTCAATCTGGTTACACAGCAGGAGTCAACACAAATCTCTATCTATCAAACAACCAAGACTACCCGGGAAACCATGATGAAATAGACATAGAGTTCCTTGGGACGACAGGAGATAAGCCATATGTGTTGCAGACAAATGTGTTCATGAGAGGAAGTGGAGATAGGAATAATGTTATAGGACGAGAGATGAGGATTCACCTCTGGTTCGACCCAACACAAGATTTTCACAACTATGCCATTCTATGGAAACCTACTGAGATCATCTTTTTGGTGGATGATGTGCCCATAAGGAGGTATCCTAGGAAGAGTGATGCAACATTCCCTGCAAGACCAATGTATGTGTACGGATCAATATGGGATGCATCTTCATGGGCAACAGAGAATGGAAAGTACAAAGCTGATTACAGATACCAACCATTCATTGGTAGATACAAGAACTTCAAGCTTCAAGGTTGCACCACTCAATCCTCCATTTCATGCCAACCACCCTCTGTTTCACCGCCTGGCTATGGAACCCTTAGCCCTCGGCAAATTGCTGCAATGCAATGGGTCCAAAACAATTACTTGGTCTATAACTATTGCCATGATCCTAGTAGAGACCATACACTTACTCCTGAATGCTAA 933 0.4384 MPSSAAALPSFLHKAPPLLSLFFFFFFSIMICSSIAQGPPSPGYYPSSKISPVSFDQGFRNLWGPQHQKFDQGTLTIWLDSYSGSGFKSLHSYRSGYFSAAIKLQSGYTAGVNTNLYLSNNQDYPGNHDEIDIEFLGTTGDKPYVLQTNVFMRGSGDRNNVIGREMRIHLWFDPTQDFHNYAILWKPTEIIFLVDDVPIRRYPRKSDATFPARPMYVYGSIWDASSWATENGKYKADYRYQPFIGRYKNFKLQGCTTQSSISCQPPSVSPPGYGTLSPRQIAAMQWVQNNYLVYNYCHDPSRDHTLTPEC* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1947 310 Gene3D - 35 310 - -
Aev10g1947 310 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 20 310 - -
Aev10g1947 310 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 20 310 IPR044791 GO:0004553
Aev10g1947 310 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 46 247 IPR000757 GO:0004553|GO:0005975
Aev10g1947 310 SUPERFAMILY Concanavalin A-like lectins/glucanases 54 310 IPR013320 -
Aev10g1947 310 PIRSF EndGlu_transf 18 310 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev10g1947 310 Pfam Glycosyl hydrolases family 16 56 239 IPR000757 GO:0004553|GO:0005975
Aev10g1947 310 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 275 310 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1947 Aev-Chr10 20850716 20852418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1947 19 310 Glycoside Hydrolase AT3G44990 67.123 7.81e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1947 K08235 - gmx:100796768 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1947 10 20850716 20852418 Aev10g1947 10 20850716 20852418 ECH
Aev10g1947 10 20850716 20852418 Aev04g2943 04 29220601 29222815 PCT