Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2943 ATGCCATCATCTCTGTCTTCTTTACTCCATAATATGTCTCCTCTGTTCTCAATTCTTGTATTCTCAATCTTGATTTGTTGTTCTAGTGCTCAGGGTCCACCTTCACCTGGCTACTACCTCAGTTCCAAATTCAGTCCTGTTAGCTTTGATCAAGGTTTTAGAAACCTCTGGGGACCTCAGCATCAGAGATTGGACCAAGACTCACTCACAATTTGGCTTGACTCTAACTCAGGGAGTGGATTCAAGTCACTTCACTCTTACCAATCTGGATACTTTGGTGCTGCAATTAAGCTTCAACCAGGCTACACTGCAGGGGTCATTACATCCCTTTATCTTTCAAACAACCAAGATCACCCAGGGAACCATGATGAAATTGACATTGAGTTCCTTGGTACAACCCCAGATAAGCCTTATGTCCTGCAGACAAATGTATACATCAGAGGAAGTGGTGATGGGAACATTATTGGCAGAGAGATGAAGTTTCATCTTTGGTTTGATCCAACACAGGATTTTCACAACTATGCTGTTCTATGGAAACCCAATGAGATAATATTTTTTGTTGATGATGTCCCCATAAGGAGGTACCCTAGGAAAAGTGATGCAACATACCCAACAAGGCCAATGTATGTGTATGGATCAATATGGGATGCATCTTCATGGGCAACAGAGGATGGAAAGTACAAAGCTGATTATAGATACCAACCCTTCTATGGAAAGTACAAGAACTTCAAGCTTCAAGGTTGTACCATTGAACGCCCTTCATCATGCCAACCACCATCTGCTTCACCATCTAGCAATGGAAGTTTGAGCCCTCAACAAATTGCAGCCATGCAATGGGTCCAAAACAATTACTTGGTTTACTATTATTGCCATGACCCTAAGAGAGACCACACTCTTACCCCTGAGTGCTAG 912 0.4243 MPSSLSSLLHNMSPLFSILVFSILICCSSAQGPPSPGYYLSSKFSPVSFDQGFRNLWGPQHQRLDQDSLTIWLDSNSGSGFKSLHSYQSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDGNIIGREMKFHLWFDPTQDFHNYAVLWKPNEIIFFVDDVPIRRYPRKSDATYPTRPMYVYGSIWDASSWATEDGKYKADYRYQPFYGKYKNFKLQGCTIERPSSCQPPSASPSSNGSLSPQQIAAMQWVQNNYLVYYYCHDPKRDHTLTPEC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2943 303 Pfam Glycosyl hydrolases family 16 50 232 IPR000757 GO:0004553|GO:0005975
Aev04g2943 303 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 303 IPR013320 -
Aev04g2943 303 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 15 303 - -
Aev04g2943 303 PIRSF EndGlu_transf 10 303 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev04g2943 303 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 28 240 IPR000757 GO:0004553|GO:0005975
Aev04g2943 303 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 15 303 IPR044791 GO:0004553
Aev04g2943 303 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 261 303 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aev04g2943 303 Gene3D - 29 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2943 Aev-Chr4 29220601 29222815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2943 16 303 Glycoside Hydrolase AT3G44990 69.072 3.42e-149 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2943 K08235 - gmx:100776165 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2943 04 29220601 29222815 Aev04g2943 04 29220601 29222815 ECH
Aev10g1947 10 20850716 20852418 Aev04g2943 04 29220601 29222815 PCT