Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1913 ATGTACAAGAACCAGCTCCAGGAGCTGGCGCAGCGGAGCTGCTTCAACCTGCCGTCGTACACGTGCATTCGGGAAGGTCCGGATCACGCGCCTAGGTTCAAAGCGACGGTGAACTTTAACGGCGAGACGTTTGAGAGTCCTCAGTACTGCACAACGCTCCGGCAGGCCGAGCACTCCGCCGCGGAGGTCGCCCTCAACTCCCTCTCCCACCGCGGTCCCTCTCACTCTCTCGCCGCCAAGATCCTCGATGAGACTGGAGTCTACAAGAACCTCTTACAGGAAATTGCACAAAGGGTAGGGGCTCCGTTGCCTCACTACACAACATTCAGGTCAGGCCTAGGACATCTACCTGTTTTTACTGGCACAGTAGAATTAGCTGGAATCACATTTACTGGTGAACCTGCCAAGAATAAGAAACAAGCTGAGAAAAATGCAGCCATGGCAGCTTGGTCAGCTCTTAAACAATTGGCAAAAGAAACTGCAGGCTCATCAACTGAACCAGAGAACAATGATGAACTCGAACAGATCACTATCGCAAGGGCTTTACTGAACTATCGCCTGAAGGAAAAGATGGCAATGTCAAATCCAAATGCTTTGATTCCATTTCCAAAGAAGTTTCATATTCAAAATACTAGGCCAACCAGTCCTCAACCTCAGCATGCCACTACGTCAAAGATCCTTCCCCTAATATGTCAAAAGACAGGACATCGACACAAGCCCTCATTGGCAACAGCAAATGAAAGTCCTCGAAGTAGGCATCCACTAGCAGCAGCAACCGCGGCAACAGCAAGTGACAATTCAATGTTGCCACCACAGTCTTGTGCACTAGAAAGTCGAGTGACCCGTCCCATGAAGTTCCCGGCAGTAGGAGCAGCACCATATGTTCCCATTCGACAAATGAGATCACCTTGCCATGGAATTGCACCTCCGGTGACTATAAGGTCTGTAGTACCTGTCTTTGCTGCACCACCTCTTACACCACCTGCTGCAGTGCCTCATCAGGTTATTCGGGCTCCTCCTGTACGACTTGCTCCTCCAGTCAACATTCGGCAAGCTGTTCCGGTGTATGCTGCTCCACCAGTAAGAAAAGAAGAATCTGCTCCCACCCTCAAAGAAAACCCCCCAACTATTAGTGCCCCTGAAATCCAGCTAGATAAACTGCCAGCTAAAATTCAAGAGACGGACACCAAGATTGAGAATGCACCACTAGAATCAGAGACAGTTCAGAGGTTGGAGCAGCTGAAAGTTTGA 1251 0.4988 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPQYCTTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPHYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKETAGSSTEPENNDELEQITIARALLNYRLKEKMAMSNPNALIPFPKKFHIQNTRPTSPQPQHATTSKILPLICQKTGHRHKPSLATANESPRSRHPLAAATAATASDNSMLPPQSCALESRVTRPMKFPAVGAAPYVPIRQMRSPCHGIAPPVTIRSVVPVFAAPPLTPPAAVPHQVIRAPPVRLAPPVNIRQAVPVYAAPPVRKEESAPTLKENPPTISAPEIQLDKLPAKIQETDTKIENAPLESETVQRLEQLKV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1913 416 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Aev10g1913 416 PANTHER - 1 415 - -
Aev10g1913 416 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Aev10g1913 416 Gene3D - 2 83 - -
Aev10g1913 416 MobiDBLite consensus disorder prediction 362 382 - -
Aev10g1913 416 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 2 1 415 - -
Aev10g1913 416 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Aev10g1913 416 MobiDBLite consensus disorder prediction 239 270 - -
Aev10g1913 416 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Aev10g1913 416 Pfam Double-stranded RNA binding motif 88 152 IPR014720 -
Aev10g1913 416 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Aev10g1913 416 Gene3D - 84 155 - -
Aev10g1913 416 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Aev10g1913 416 SUPERFAMILY dsRNA-binding domain-like 88 158 - -
Aev10g1913 416 SMART DRBM_3 88 154 IPR014720 -
Aev10g1913 416 SMART DRBM_3 2 69 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1913 Aev-Chr10 20578445 20581559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1913 - - gmx:100815739 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1913 10 20578445 20581559 Aev10g1913 10 20578445 20581559 ECH
Aev10g1913 10 20578445 20581559 Aev04g3004 04 29858119 29862069 PCT