LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3004	ATGTATAAGAACCAGCTTCAGGAGCTGGCACAGCGAAGCTGCTTCAACCTCCCTTCGTACACGTGCATAAGGGAAGGTCCCGATCACGCGCCGCGGTTCAAGGCTACCGTGAACTTTAACGGCGAGGTCTTCGAGAGTCCTCACTACTGCTCCACCCTCCGCCAGGCGGAGCACTCCGCCGCAGAGGTCGCTCTCAACTCACTCTCCCACCGTGGACCCTCTCACTCCCTCGCCGCAAGGATCCTTGATGAGACAGGAGTCTACAAGAATCTCTTACAGGAAATTGCACAAAGGGTAGGGGCCCCATTGCCACAATACACAACATTCAGGTCAGGCCTAGGACACCTACCTGTTTTTACCGGGACTGTGGAATTAGCCGGAATTACGTTTACTGGCGAACCTGCCAAGAACAAGAAACAAGCAGAGAAAAATGCAGCAATGGCAGCTTGGTCATCCCTAAAACAATTGGCAAAAGAAACTGCTAGCTCTTCATCTGAACCGGAGAACAACGACGAGCTTGAACAGATCACAATTGCACGAGCCTTGCTAAACTACCGTCTGAAGGAAAAGATGGCAATGTCAGATCCAAATGCTGTGATTCAATTTCCGAGGAAGTTTCAGGTTCCGAATCATAGGCCAACTAGTCCTCAACCACCATCCACCGCAACATCAAAGATTCTTCCCTTGATTTTCCCAAGGACAACCCCTCGAAACAGGCCTTCGATGGCAACAGCAAATGAAAATCCTCGAAGCAGGCATGCAGCAGCAACAACAGCTTCCGGTGACAGTTCCATAATGCCACCAGTTTCTTCTACATTAGAAAGCCGAGGTAACCGCCGCCCAAGGTTCCCTGCAGCAGGAGCAGCACCTTATGTTCCTATTCGACAAATGAGATCACCTTGCCAAGGCATTGCGCCTCCGGTGACTATAAGAACTGCAGTACCTGTATTCTCTGCACCACCTCTTCCACCACCAGCTGCACTGTCCCACCAAGTAATGCGGGCTCCCCCTATACGAATCGCTCCTCCTGTCACTATTCGACAAGCTGTTCCGGTATTTGCTGCTCCACCGGTACGAAAAGATGAGCCTGTCCCTGTTCAGAAAGATGACCCTATTCCTGTACCAAAAGAAGAAACTATTCCACCACCGCCGACAGCCAATAGTGCACCAACCGAGGAAGATAAATTGCCAGCGAAAACTGAGGAGACAGATACCAAGGCAGAAAACATTCTACCGGAATCCGAGACACTGAAGGGCTTGGAGCAGCTCAACATTTGA	1278	0.5078	MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIARALLNYRLKEKMAMSDPNAVIQFPRKFQVPNHRPTSPQPPSTATSKILPLIFPRTTPRNRPSMATANENPRSRHAAATTASGDSSIMPPVSSTLESRGNRRPRFPAAGAAPYVPIRQMRSPCQGIAPPVTIRTAVPVFSAPPLPPPAALSHQVMRAPPIRIAPPVTIRQAVPVFAAPPVRKDEPVPVQKDDPIPVPKEETIPPPPTANSAPTEEDKLPAKTEETDTKAENILPESETLKGLEQLNI*	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3004	425	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	1	70	IPR014720	-
	Aev04g3004	425	Gene3D	-	2	83	-	-
	Aev04g3004	425	SMART	DRBM_3	88	154	IPR014720	-
	Aev04g3004	425	SMART	DRBM_3	2	69	IPR014720	-
	Aev04g3004	425	MobiDBLite	consensus disorder prediction	237	277	-	-
	Aev04g3004	425	Pfam	Double-stranded RNA binding motif	88	153	IPR014720	-
	Aev04g3004	425	Pfam	Double-stranded RNA binding motif	2	68	IPR014720	-
	Aev04g3004	425	MobiDBLite	consensus disorder prediction	359	425	-	-
	Aev04g3004	425	MobiDBLite	consensus disorder prediction	232	286	-	-
	Aev04g3004	425	SUPERFAMILY	dsRNA-binding domain-like	2	68	-	-
	Aev04g3004	425	SUPERFAMILY	dsRNA-binding domain-like	88	160	-	-
	Aev04g3004	425	CDD	DSRM_AtDRB-like_rpt2	86	154	IPR044451	GO:0003725
	Aev04g3004	425	MobiDBLite	consensus disorder prediction	394	411	-	-
	Aev04g3004	425	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	87	155	IPR014720	-
	Aev04g3004	425	CDD	DSRM_AtDRB-like_rpt1	1	69	IPR044450	GO:0003725
	Aev04g3004	425	PANTHER	DOUBLE-STRANDED RNA-BINDING PROTEIN 2	1	403	-	-
	Aev04g3004	425	Gene3D	-	84	155	-	-
	Aev04g3004	425	PANTHER	-	1	403	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3004	Aev-Chr4	29858119	29862069	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3004	-		-	gmx:100815739	596.66

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev04g3004	04	29858119	29862069	Aev04g3004	04	29858119	29862069	ECH
	Aev10g1913	10	20578445	20581559	Aev04g3004	04	29858119	29862069	PCT