Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1908 ATGCGAATCTTCGTTCTCCTTTCCCTCACTTCCCTCCTCCTCTTCTCCTCCTTCTCCGCCACTCTCTGCAAGGACTCCACCGCCGCCACTAACGGCGGCGACGACGACGAAGATCTCAGTTTCCTCGAGGAGCCTGATGAAAGCTCCGCCTCCGACCATCACCACCAGTACGATGGCCACTATCCGGATCCGGACCAAATCGATGATGACGATCTCGAAGACTTCTCCGGCTTCGACGAGACGCAGTACAATCCCGACGCGTACAAGGAGCCTGAGGTAGACGACAAGGACGTCGTCGTTTTGAAGGATAAAAACTTCACCGACGTCGTCAAGAACAACCGATTCGTCATGGTTGAGTTCTACGCGCCGTGGTGCGGTCACTGCCAGGCCTTGGCTCCCGAGTACGCCGCCGCCGCGACGGAGCTGAAGGGCGAGAATGTCATTCTAGCCAAGGTTGATGCGACGGAGGAGAACGAATTGGCGCAGCAGTACGATATCCAGGGTTTCCCCACTGTGTACTTCTTCGTCGATGGAGTTCACAAGCCTTACAATGGCCAAAGAACCAAAGATGCTATAGTGAGCTGGATCAAGAAAAAGACAGGCCCTGGTATTCACAACATTACTACTGTGGAGGATGCTGAACGCATTTTGACTTCTGAAAGCAAAGTTGTTTTGGGATTCCTCAACGCTTTGGTTGGTCCTGAGAGTGACGAGCTAGCTGCCGCTTCAAGACTTGAGGATGATGTGACTTTTTATCAAACTGTGAATGCTGATGTCGCAAAGCTTTTCCATATTGACCCAAGTGTTAAACGCCCTGCTTTGATCCTGATCAAGAGAGAGGATGAAAAACTGAGCCATTTTGATGGCAAATTTGAGAAGTCTGCAATAGCAGACTTTGTATTCTCCAACAAGCTTCCTTTGGTAACAATTTTTACTAGAGAAAGTGCACCATCAGTCTTTGAAAATCCAATCAAGAAACAGGTGTTGCTGTTTGCGACTTCAAATGATTCAGCAAAGTTCCTCCCAGTATTTCAGGAAGCAGCAAAGTTTTTCAAGGGGAAGCTGATCTTTGTATATGTAGAAATGGATAATGAAGATGTTGGAAAGCCTGTTTCAGAATACTTTGGTATTTCCGGAAATGCTCCCAAAATAATTGGATACACTGGAAATGATGATGGAAAAAAATTCTTGCTTGATGGAGATGTGATTGTTGACAAAATTAAGGCATTTGGGGAAGATTTCCTTCAAGACAAGCTAAAACCTTTCTACAAGTCAGATCCAGTTCCGGAAAGTAATGATGGGGATGTGAAGATAGTGGTTGGGAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTTGAGATTTATGCTCCTTGGTGTGGCCATTGCCAAGCTCTGGAACCAATATACAACAAACTTGCGAAACATCTTCGTGATATTGACTCTATTGTTATAGCCAAGATGGATGGAACTACAAATGAGCATCCTAGGGCAAAGTCTGATGGATTCCCCACACTTCTCTTCTTCCCGGCTGGAAACAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCATTTTATAAGTTCCTCAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCACAACTTCTAAATCCGAGAGCACCGATATCAAGGAGGGTTCTGATGCCAAGGAGAGCAAGAGTAGCAGTAGCGATGTTAAGGATGAACTATGA 1749 0.4574 MRIFVLLSLTSLLLFSSFSATLCKDSTAATNGGDDDEDLSFLEEPDESSASDHHHQYDGHYPDPDQIDDDDLEDFSGFDETQYNPDAYKEPEVDDKDVVVLKDKNFTDVVKNNRFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQQYDIQGFPTVYFFVDGVHKPYNGQRTKDAIVSWIKKKTGPGIHNITTVEDAERILTSESKVVLGFLNALVGPESDELAAASRLEDDVTFYQTVNADVAKLFHIDPSVKRPALILIKREDEKLSHFDGKFEKSAIADFVFSNKLPLVTIFTRESAPSVFENPIKKQVLLFATSNDSAKFLPVFQEAAKFFKGKLIFVYVEMDNEDVGKPVSEYFGISGNAPKIIGYTGNDDGKKFLLDGDVIVDKIKAFGEDFLQDKLKPFYKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPIYNKLAKHLRDIDSIVIAKMDGTTNEHPRAKSDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTTTSKSESTDIKEGSDAKESKSSSSDVKDEL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1908 582 Pfam Thioredoxin 98 198 IPR013766 -
Aev10g1908 582 Pfam Thioredoxin 436 521 IPR013766 -
Aev10g1908 582 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 566 - -
Aev10g1908 582 MobiDBLite consensus disorder prediction 46 63 - -
Aev10g1908 582 MobiDBLite consensus disorder prediction 27 89 - -
Aev10g1908 582 SUPERFAMILY Thioredoxin-like 91 201 IPR036249 -
Aev10g1908 582 CDD PDI_a_family 99 196 - -
Aev10g1908 582 ProSitePatterns Thioredoxin family active site. 456 474 IPR017937 -
Aev10g1908 582 ProSiteProfiles Thioredoxin domain profile. 78 201 IPR013766 -
Aev10g1908 582 SUPERFAMILY Thioredoxin-like 432 543 IPR036249 -
Aev10g1908 582 CDD PDI_a_PDI_a'_C 436 538 - -
Aev10g1908 582 PANTHER PROTEIN DISULFIDE ISOMERASE 2 566 - -
Aev10g1908 582 SUPERFAMILY Thioredoxin-like 206 315 IPR036249 -
Aev10g1908 582 Gene3D Glutaredoxin 430 544 - -
Aev10g1908 582 Gene3D Glutaredoxin 87 200 - -
Aev10g1908 582 CDD PDI_b_family 204 303 - -
Aev10g1908 582 Pfam Thioredoxin-like domain 240 410 - -
Aev10g1908 582 SUPERFAMILY Thioredoxin-like 303 433 IPR036249 -
Aev10g1908 582 TIGRFAM pdi_dom: protein disulfide-isomerase domain 101 199 IPR005788 GO:0003756
Aev10g1908 582 TIGRFAM ER_PDI_fam: protein disulfide isomerase 96 582 IPR005792 GO:0003756
Aev10g1908 582 Gene3D Glutaredoxin 201 304 - -
Aev10g1908 582 PRINTS Thioredoxin family signature 124 133 - -
Aev10g1908 582 PRINTS Thioredoxin family signature 165 176 - -
Aev10g1908 582 PRINTS Thioredoxin family signature 116 124 - -
Aev10g1908 582 MobiDBLite consensus disorder prediction 549 582 - -
Aev10g1908 582 Gene3D Glutaredoxin 305 429 - -
Aev10g1908 582 ProSiteProfiles Thioredoxin domain profile. 413 543 IPR013766 -
Aev10g1908 582 CDD PDI_b'_family 325 415 - -
Aev10g1908 582 MobiDBLite consensus disorder prediction 560 582 - -
Aev10g1908 582 ProSitePatterns Thioredoxin family active site. 117 135 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1908 Aev-Chr10 20541178 20544455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1908 K09580 - gmx:100804924 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1908 10 20541178 20544455 Aev10g1908 10 20541178 20544455 ECH
Aev10g1908 10 20541178 20544455 Aev04g3013 04 29908706 29912088 ECH
Aev10g1908 10 20541178 20544455 Aev04g3013 04 29908706 29912088 PCT