Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3013 ATGCCAAGCCGTAAACGACTCGTCGTTTTACTCTCCCTCACCACTCTCCTCCTCCTCTCCTCGTTCTCCTTCACAATCAGCAAAACCACCCCTCAAAACGACAACACCGACGACGAAAACGACGATGAAGATCTCACCTTCCTCGACGAACCTGATGCCACCACCACCAAACACAACTTCCCAGATCCCGACGACAACGACGAAGAAGACGACGGCGATGTCGGAGACGACTTCGGCGACTTCTCCAGCTACGACCACTCGCAGCACGACGAGGCTGACGATGACGAACCTGATATTGACGACAAAGACGTCGTCGTTTTGAAGGAGCGGAACTTCACGACCGTGGTGGAGAATAACCCTTACGTGATGGTGGAATTCTATGCGCCGTGGTGCGGACACTGTAAGGCCCTGGCGCCGGAATACGCCGCCGCCGCCACGGAGCTGAAGCCGGACGGCGTCGTTCTGGCGAAGGTGGACGCCACGGCGGAGCACGAGCTTGCGCACGAGTACGATGTTCAAGGATTCCCCACCGTATTCTTCTTCGTCGATGGAGTTCACAAACCTTACACTGGCCAGAGGAACAAGGATGCTATAGTGACTTGGATTAGGAAGAAGATAGGGCCTGGTGTGTATAACATTACTACATTGGATGATGCTGAACAAAATTTGACATCTGAGAGTAAAGTTGTTTTGGCTTTCCTTGATTCTTTAGTTGGTGCCGAGAGTGAGGAGCTAGCTGCGGCATCCAAAATTGAGGATGGTGTCAACTTTTATCAAACTGTGGTTCCTAATGTGGCGAAGCTTTTCCATATTGATCCAAATGCTAAACGCCCTGCTATGGTCTTGGTCAAGAAAGAAGAGGAGAAACTCAGCCATTTTGATGGTCAATTTGTAAGATCTGCAATAGCAGACTTTGTATCCTCCAACAAACTTCCTTTGGTTACAACTTTCACAAGAGAAAGTGCTCCATCAATCTTCGAAAGTAAAATAAAGAAACAGATGCTGCTGTTCGTGAAAAGAAAAGATTCAAAGAAGTTCCTTCCAGTGTTTCGAGAAGCAGCAAAATCTTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATATTGAAGATGTTGGAGTGCCTATTGCGGATTATTTTGGTATCACTGGGAGTGCTCCCAAAATACTTGCATTTACTGGAAATGATGATGGAAGAAAATTTTTGCATGACGGTGAGGTGACTTTCGACACAATTAAGGCATTTGGGGAAGATTTCCTTGAAGAAAAGCTAAAACCTTTCCTCAAGTCAGATCCAGTTCCTGAAACTAATGATGGTGATGTGAAAATTGTTGTTGGGAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTCGAGATATATGCTCCCTGGTGTGGCCATTGCCAAGCACTGGAACCAACATACAACAAGCTTGCGCGGCATCTTCGCGGCATTGATTCTATTGTAATAGCCAAGATGGATGGTACAACAAATGAGCATCCAAAGGCAAAGGCTGATGGGTTCCCCACTATTCTGTTCTTCCCAGCAGGCAAAAAGAGTTCTGACCCTATTACAGTTGATGCCGATCGAACCGTGGTTGCCTTTTATAAGTTCCTCAGGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCTCAACTTCTAAAACAGAGAGGTCTGATGTCAAGGGTAGTAGCAGAACCGACCTGAAGGATGAACTATGA 1743 0.4653 MPSRKRLVVLLSLTTLLLLSSFSFTISKTTPQNDNTDDENDDEDLTFLDEPDATTTKHNFPDPDDNDEEDDGDVGDDFGDFSSYDHSQHDEADDDEPDIDDKDVVVLKERNFTTVVENNPYVMVEFYAPWCGHCKALAPEYAAAATELKPDGVVLAKVDATAEHELAHEYDVQGFPTVFFFVDGVHKPYTGQRNKDAIVTWIRKKIGPGVYNITTLDDAEQNLTSESKVVLAFLDSLVGAESEELAAASKIEDGVNFYQTVVPNVAKLFHIDPNAKRPAMVLVKKEEEKLSHFDGQFVRSAIADFVSSNKLPLVTTFTRESAPSIFESKIKKQMLLFVKRKDSKKFLPVFREAAKSFKGKLIFVHVEMDIEDVGVPIADYFGITGSAPKILAFTGNDDGRKFLHDGEVTFDTIKAFGEDFLEEKLKPFLKSDPVPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLARHLRGIDSIVIAKMDGTTNEHPKAKADGFPTILFFPAGKKSSDPITVDADRTVVAFYKFLRKHASIPFKLQKPTSTSKTERSDVKGSSRTDLKDEL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3013 580 ProSiteProfiles Thioredoxin domain profile. 72 207 IPR013766 -
Aev04g3013 580 TIGRFAM pdi_dom: protein disulfide-isomerase domain 108 205 IPR005788 GO:0003756
Aev04g3013 580 Gene3D Glutaredoxin 207 310 - -
Aev04g3013 580 Pfam Thioredoxin 442 527 IPR013766 -
Aev04g3013 580 Pfam Thioredoxin 104 204 IPR013766 -
Aev04g3013 580 Pfam Thioredoxin-like domain 246 416 - -
Aev04g3013 580 ProSitePatterns Thioredoxin family active site. 123 141 IPR017937 -
Aev04g3013 580 MobiDBLite consensus disorder prediction 555 580 - -
Aev04g3013 580 MobiDBLite consensus disorder prediction 64 78 - -
Aev04g3013 580 MobiDBLite consensus disorder prediction 560 580 - -
Aev04g3013 580 SUPERFAMILY Thioredoxin-like 210 321 IPR036249 -
Aev04g3013 580 SUPERFAMILY Thioredoxin-like 98 207 IPR036249 -
Aev04g3013 580 CDD PDI_b'_family 321 421 - -
Aev04g3013 580 Gene3D Glutaredoxin 436 550 - -
Aev04g3013 580 PANTHER PROTEIN DISULFIDE ISOMERASE 4 568 - -
Aev04g3013 580 Gene3D Glutaredoxin 311 435 - -
Aev04g3013 580 CDD PDI_a_family 105 202 - -
Aev04g3013 580 Gene3D Glutaredoxin 94 206 - -
Aev04g3013 580 SUPERFAMILY Thioredoxin-like 438 549 IPR036249 -
Aev04g3013 580 SUPERFAMILY Thioredoxin-like 309 439 IPR036249 -
Aev04g3013 580 ProSiteProfiles Thioredoxin domain profile. 428 549 IPR013766 -
Aev04g3013 580 CDD PDI_a_PDI_a'_C 442 544 - -
Aev04g3013 580 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 568 - -
Aev04g3013 580 TIGRFAM ER_PDI_fam: protein disulfide isomerase 102 576 IPR005792 GO:0003756
Aev04g3013 580 CDD PDI_b_family 210 309 - -
Aev04g3013 580 MobiDBLite consensus disorder prediction 28 100 - -
Aev04g3013 580 PRINTS Thioredoxin family signature 171 182 - -
Aev04g3013 580 PRINTS Thioredoxin family signature 122 130 - -
Aev04g3013 580 PRINTS Thioredoxin family signature 130 139 - -
Aev04g3013 580 ProSitePatterns Thioredoxin family active site. 462 480 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3013 Aev-Chr4 29908706 29912088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3013 K09580 - gmx:100785630 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3013 04 29908706 29912088 Aev04g3013 04 29908706 29912088 ECH
Aev10g1908 10 20541178 20544455 Aev04g3013 04 29908706 29912088 ECH
Aev10g1908 10 20541178 20544455 Aev04g3013 04 29908706 29912088 PCT