Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1884 ATGGGAAACAGAACAACCCTTTTGGTAGTATTGCTCCTTGTTGTTTGCCATGGCGTGGCTATGGCAAAGGGGTTATGGAGGAACAATGATGAGAAGAAGGAGGGGCATCATCTGAAGTATGACAGGAAGAGGATGTTCATGATGATGCATTCAAAGCGTGTGGTGAAGACTGATGCAGGGGAGATGAGAGTTCTTCAAAGCTATGGTGGTAAGATCATGGAGAAGCCAATGCACATTGGCTTCATCCATATGGAACCCAGGTCACTCTTCATTCCTCAGTACCTTGACTCCACCTTGATCATCTTTCTGCATCAAGGGGAAGCAAAGGTGGGAATGATGTATAATGGTAAACTAGCAGAAAGAAAATTGAAGATGGGTGATGTGTACAGAATCCCAGCTGGTGCAGCATTCTATATGGTGAATATTGGGGAGGGTGATCAGAGTCTTCACATTATCTGTAGTATTGATCCCTCTGAAAGCATAGGAATAGGCACAATGCAGTCCTTCTATATTGGGGGAGGAGCCAATCCATCTTCAATCCTTTCTGGCTTTGAGCCTGAAATCCTTGAAACTGCCTTTAATGCAACAGGAGCAGAACTACAGAAAATCTTCACAAGGAAACATGAGGGCCCAATTGTGCATATAGATGAGTCAAATGACACAAGTCTATGGTCCAAATTCCTTCACCTCAAGGAGGAGGACAAACTGCAGCACTTGAAGAAAATGGTGCAAGATCAAGGCGAATTCGATGATGATGAAGAGGAAGAAGTAGAAGAAGAGAAGCAGAAAAAATGGTCATGGAGGAAGCTCTTGGACTCAGTGCTATGTAATGATAACGAGAAGTCAAAGGACAAGGTTGCCCATAAATCCACTCACTCTTGCAACCTTTATGATAGAAAACCAGATTTCAGCAATAGTTATGGTTGGAGTGTTACATTGGATGGCTCTGATTATCATCCACTTAGAAGATCTGACATTAGCCTTTACCATGTCAACCTCTCAGCGGGAGCAATGATGACACCCCATGTGAATCCAAGGGCAACAGAGTATGGCATAGTGTTGAGGGGAAGTGGCAGAATCCAAATTGTGTTTCCAAATGGAAGCAATGCAATGGACACACAGATAAAAGAAGGGGACGTGTTCTTTGTGCCAAGGTACTTCCCTGTATGCCAAATAGCATCAAGCAATGAATCCCTCGAGTTCTTCGGGTTCACCACCTCTGCTAAGAAGAACAGGCCACAGTTCCTTGTGGGTGCCAACTCTCTCATGAGGACCATGATGGGTCCTGAGCTTGCTGCTGCATTTGGTGTGAGTGAGGAAACCATGAGGCGCATGGTTGAGGCACAGAGTGAGGCTGTGATATTGCCAACTTCATGGTCTGAACCTAAGGAAAAGGAGGAAAAGAAGAAAGTGGAGAAGAAGGAGAGTGCTATTCCAAAGCTTATAAGGAATGCCATGATTATGGGGTTTTGA 1473 0.4453 MGNRTTLLVVLLLVVCHGVAMAKGLWRNNDEKKEGHHLKYDRKRMFMMMHSKRVVKTDAGEMRVLQSYGGKIMEKPMHIGFIHMEPRSLFIPQYLDSTLIIFLHQGEAKVGMMYNGKLAERKLKMGDVYRIPAGAAFYMVNIGEGDQSLHIICSIDPSESIGIGTMQSFYIGGGANPSSILSGFEPEILETAFNATGAELQKIFTRKHEGPIVHIDESNDTSLWSKFLHLKEEDKLQHLKKMVQDQGEFDDDEEEEVEEEKQKKWSWRKLLDSVLCNDNEKSKDKVAHKSTHSCNLYDRKPDFSNSYGWSVTLDGSDYHPLRRSDISLYHVNLSAGAMMTPHVNPRATEYGIVLRGSGRIQIVFPNGSNAMDTQIKEGDVFFVPRYFPVCQIASSNESLEFFGFTTSAKKNRPQFLVGANSLMRTMMGPELAAAFGVSEETMRRMVEAQSEAVILPTSWSEPKEKEEKKKVEKKESAIPKLIRNAMIMGF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1884 490 PANTHER OS03G0336100 PROTEIN-RELATED 1 465 - -
Aev10g1884 490 PANTHER OS03G0336100 PROTEIN 1 465 - -
Aev10g1884 490 Pfam Cupin 54 198 IPR006045 -
Aev10g1884 490 Pfam Cupin 295 442 IPR006045 -
Aev10g1884 490 CDD cupin_7S_vicilin-like_C 301 452 - -
Aev10g1884 490 Gene3D Jelly Rolls 39 227 IPR014710 -
Aev10g1884 490 SUPERFAMILY RmlC-like cupins 52 452 IPR011051 -
Aev10g1884 490 Gene3D Jelly Rolls 286 458 IPR014710 -
Aev10g1884 490 SMART Cupin_1_3 46 201 IPR006045 -
Aev10g1884 490 SMART Cupin_1_3 294 443 IPR006045 -
Aev10g1884 490 CDD cupin_7S_vicilin-like_N 54 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1884 Aev-Chr10 20385085 20387639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1884 54 455 Miscellaneous Gene Families AT2G18540 29.880 2.16e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1884 - - gmx:100818796 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1884 10 20385085 20387639 Aev10g1884 10 20385085 20387639 ECH
Aev10g1884 10 20385085 20387639 Aev04g3039 04 30123106 30125766 PCT