Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3039 ATGGCAAATTTGACGACCCTTTTGTTCATATTGCTTGTTCTTTGCAATGGTTTGGCCATAACAATGGGATTCTTCAACAATGATGATGATGATTGGGGTGTAGAGTTTGAAAGCAGAGGAGAAAAGAGAAGGGAAAGGAGAGGAGGGAGTGATTCTTCAAGGTTGTTCTTGATGCAGAAGTCAAAGAGTTTGGTTAGGACTGAAGCAGGGGAAATGAGAGTGTTTAGGAGCAATGGTGGTGGAAGGAGCTTGGAGAGGCGAATGCACATTGGATTCATCAATATGGAACCAAAGTCATTGTTCATTCCTCAGTACCTAGACTCCAATTTGGTCATATTCATCCATAGAGGGGAAGCAAAATTGGGAATAATTTACAAAGAAAAATTATCAGAGAGAAGGTTAAAAATAGGGGATGTATACCTAATTCCAGCAGGTACACCTTTCTATTTGGTGAATGTTGGTGAAGGTCAGAGACTCCACATTATCTGTAGCATTGACCCCTCTCACAGATTTGGAGATGACTCTTTCCATTCCTTCTACATTGGTGGTGGAGGAGATAATACAGGGTCAGTGCTTTCTGGATTTGAACCTGAGATTCTTCAATCTGCTTTGAATGCATCAAGAAGGGATGTAGATAAAATCTTGAGAAGCAGAATAGATGGGCCAATAGTGTTTGTGGGTGATGATCATGCCCCTAGCCTATGGACCAAATTCCTCCAAATGAAGGAAGAAGACAAAGTGGAACACATGAAGAAAATGGTGCAACACGAAGAAATGGAGAATGAAGAAGAAGAGGAAGAGCAATCAATTTGGTCATGGAGGAAGCTATTGAGAAATGCAGTGTTTGGAAGGAGGGAGAACAAGAAATCAGATTATAAAGGCAGTGGTGATTCTCCTGATTCATACAACATATATGATAAAAAACCAGATTTCAGAAATGCTTATGGTCATAGCATTGCATTGGATCAGGATGAGTACCATCCACTCAGAGATGCTTCCATTGGTGTTTACCTTGTCAATCTTACAGCGGGATCGATGATGGCACCACACTTGAATCCAAGAGGAAAAGAGTATGGCATAGTGCTTCGTGGCTCAGGCACACTCCAGATTCTGTTTCCAAACGGAACAAGCGCTATGAGCACTCACATTACAGAAGGCGACGTCTTCTTCGTCCCTCGCTTCTTCCCTTTCTGCCACATTGCTTCAAGGAACGGCCCTTCCTTGGAGTTCTTCGGCTTCACCACCTCTTCTCTCAAGAACACCCCTCGCTTCCTCGCCGGCCCTTCCTCTATCCTGAGGGCTATGATGGGCCCTGAGCTCGCCGCCGGCTTCGGCGTCTCCGAGGACACTATGCGGCGCGTGGTGTTCGCTCAGGGGGAGGATGTGATCTTTCCGTCCACATGGGCTGCGCCCGGAGATGTTGATGTTGATGATGATGAGAAGAAGAAGAAGCAGAGGAAGAGGGATGAAGAACAAGAAGATGTTGCTATGTGA 1494 0.4491 MANLTTLLFILLVLCNGLAITMGFFNNDDDDWGVEFESRGEKRRERRGGSDSSRLFLMQKSKSLVRTEAGEMRVFRSNGGGRSLERRMHIGFINMEPKSLFIPQYLDSNLVIFIHRGEAKLGIIYKEKLSERRLKIGDVYLIPAGTPFYLVNVGEGQRLHIICSIDPSHRFGDDSFHSFYIGGGGDNTGSVLSGFEPEILQSALNASRRDVDKILRSRIDGPIVFVGDDHAPSLWTKFLQMKEEDKVEHMKKMVQHEEMENEEEEEEQSIWSWRKLLRNAVFGRRENKKSDYKGSGDSPDSYNIYDKKPDFRNAYGHSIALDQDEYHPLRDASIGVYLVNLTAGSMMAPHLNPRGKEYGIVLRGSGTLQILFPNGTSAMSTHITEGDVFFVPRFFPFCHIASRNGPSLEFFGFTTSSLKNTPRFLAGPSSILRAMMGPELAAGFGVSEDTMRRVVFAQGEDVIFPSTWAAPGDVDVDDDEKKKKQRKRDEEQEDVAM* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3039 497 CDD cupin_7S_vicilin-like_N 64 226 - -
Aev04g3039 497 Coils Coil 247 267 - -
Aev04g3039 497 Gene3D Jelly Rolls 305 471 IPR014710 -
Aev04g3039 497 MobiDBLite consensus disorder prediction 469 497 - -
Aev04g3039 497 Pfam Cupin 302 450 IPR006045 -
Aev04g3039 497 Pfam Cupin 83 163 IPR006045 -
Aev04g3039 497 CDD cupin_7S_vicilin-like_C 309 460 - -
Aev04g3039 497 PANTHER OS03G0336100 PROTEIN-RELATED 1 473 - -
Aev04g3039 497 Gene3D Jelly Rolls 48 240 IPR014710 -
Aev04g3039 497 PANTHER OS03G0336100 PROTEIN 1 473 - -
Aev04g3039 497 SUPERFAMILY RmlC-like cupins 63 460 IPR011051 -
Aev04g3039 497 MobiDBLite consensus disorder prediction 474 497 - -
Aev04g3039 497 SMART Cupin_1_3 302 452 IPR006045 -
Aev04g3039 497 SMART Cupin_1_3 62 212 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3039 Aev-Chr4 30123106 30125766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3039 63 474 Miscellaneous Gene Families AT2G18540 30.607 1.83e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3039 - - aip:107629183 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3039 04 30123106 30125766 Aev04g3039 04 30123106 30125766 ECH
Aev10g1884 10 20385085 20387639 Aev04g3039 04 30123106 30125766 PCT