Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1855 ATGTCGGGGTTACTTAATTCTTCTCTGAACGGATCTGCTTCAAATTTTCCAGACGGTGCTGGACGGTCTTTCGCTACATCATTCTCTGGTCAGTCTGGTGCAGCTTCCCCAATTTTTCATCACACTGGAGGCCTTCAAGGGTTGCATAACATTCATGGTAGCTTCAATGTTCCAAACATGCCTGGTACACTTACATCAAGAAACTCAGCAATGAACAGCGTTCAAACTGGAGGAGTTCAACAACCTACAGCAAACCTTTCTAGTGGAAGATTTGCATCAAATAATCTGCCTGTTGCTTTATCACAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCAACAATAGAGGAGGTATAAGTGTTGTTGGAAATCCTGGATTTACTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCACCAATCTTGGGAAATGCAGATTCTCGAATCACAAGTTCTATGGGAAACATGGTTGGTGGTGGAAATATCGGAAGGATAAGCTCTGCTGGAGGATTGTCTGTACCTGGGCTTGGTTCTCGTCTAAATTTAAGTGGAAGTAGCGGATCTGGTGGCTTAGGTGTTCAAGGACAGAATCGGTTGCTGAGTGGTGTACTCCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAACTCTTATCCTAGTGCTGGAGGTCCACTTTCACAAAGACATGTTCAAGCAGTAAATAATTTAAACTCAATGGGGATGTTAAGTGATGTGAATTCTAGTGATAGTTCACCTTTTGATATCAATGACTTCCCTCAACTGACAAGTCGTCCTAATTCTGCTGGAGGGCCTCAAGGACAGTTGGGCTCTTTACGAAAACAGGGTCTTGGTGTGAGCCCCATTGTTCAACAAAACCAAGAGTTTAGTATTCAAAACGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAGTGCAGACTTTGGTATGGAAATGCACCAAAAAGAACAACTTCATGACAATTCTGTGTCAATGATGCAGCCTCAACATTTCTCTATGGGAAGGTCTGCTGGTTTCAGCTTGGGGGGATCATATTCTTCACATCGTACACAACAGCAACAGCTGCATGCTCCTTCTGTCAGTAGCAGTGGTGTCTCGTTTTCATCTGTTAACAATCAAGATCTTCTCCATCTGCATGGGTCAGATATTTTCCCATCTTCACACTCAACATATCATTCACAGGCCAGTGGACCTCCTGGCATTGGATTAAGGCCTCTAAATTCTCCAAACACAGTTTCTGGTATGAATTCATATGAACAACTCATCCAGCAGTATCAACAACACCAGAACCAGTCCCAGTCCCAGTTCCGCCTTCAGCAAATGTCAGCTTTAAATCAGTCATTCAGGGATCAGGGCATGAAGTCTATGCAAAGTGCACAATCTAGTCCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTGACATCTCTTGCTCTTGGAATTGATCTCACAACACTTGGGTTGAATTTGAATTCATCAGAAAACCTTCACAAGACTTTCGGATCTCCGTGGTCTGATGAACCAACTAAGGGTGATCCCGAGTTCAATGTGCCACAGTGTTATCATGCCAAACAGCCTCCTGCCCTACATCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACCTTATTCTACATATTTTACAGCATGCCCAAAGATGAAGCTCAACTATATGCAGCAAATGAACTGTACAAACGAGGCTGGTTTTATCACAAAGAGCACCGGTTGTGGTTTATCAGAGTTCCTAACATGGAGCCGCTTGTCAAAACTAACACATACGAGAGAGGATCTTACCATTGTTTTGATCCAAGCGCTTTCGAGACAATTCGGAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCGTCGCTGGCTCAACATTGA 2004 0.4326 MSGLLNSSLNGSASNFPDGAGRSFATSFSGQSGAASPIFHHTGGLQGLHNIHGSFNVPNMPGTLTSRNSAMNSVQTGGVQQPTANLSSGRFASNNLPVALSQLSHGSSHGHSGVNNRGGISVVGNPGFTSSTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNADSRITSSMGNMVGGGNIGRISSAGGLSVPGLGSRLNLSGSSGSGGLGVQGQNRLLSGVLPQGSPQVISMLGNSYPSAGGPLSQRHVQAVNNLNSMGMLSDVNSSDSSPFDINDFPQLTSRPNSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGSADFGMEMHQKEQLHDNSVSMMQPQHFSMGRSAGFSLGGSYSSHRTQQQQLHAPSVSSSGVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQASGPPGIGLRPLNSPNTVSGMNSYEQLIQQYQQHQNQSQSQFRLQQMSALNQSFRDQGMKSMQSAQSSPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPTKGDPEFNVPQCYHAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFDPSAFETIRKDNFVLHYEMLEKRPSLAQH* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1855 667 Pfam NOT2 / NOT3 / NOT5 family 536 658 IPR007282 GO:0006355
Aev10g1855 667 Gene3D - 486 667 IPR038635 -
Aev10g1855 667 Coils Coil 445 465 - -
Aev10g1855 667 MobiDBLite consensus disorder prediction 266 302 - -
Aev10g1855 667 MobiDBLite consensus disorder prediction 365 396 - -
Aev10g1855 667 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 667 - -
Aev10g1855 667 MobiDBLite consensus disorder prediction 266 297 - -
Aev10g1855 667 PANTHER CCR4 NOT-RELATED 2 667 IPR040168 GO:0030015
Aev10g1855 667 MobiDBLite consensus disorder prediction 417 444 - -
Aev10g1855 667 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1855 Aev-Chr10 20167090 20171408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1855 K12605 - gmx:100806559 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1855 10 20167090 20171408 Aev04g3080 04 30553407 30558314 PCT