Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1853 ATGGCTTCTTCACAAGCGGTGCATCAAATTGCAACCCCTAGGAAGAAGATGACCAAACCACTAACCGGAAAAAGAGATGATACCGCTTTGCATTCTGCAGCAAGAACAGGGAATCTGGCTGTTCTGAGGGACATCCTTAGCGGTACTGAAGAGGATGAGCTGCTTGAGATATTGAAAAGGCAGAACCAAGATGGAGAAACAGCCCTTTATGTAGCTGCTGAATATGGGTATGTTGATGTGGTTAGGGAGATGATTCATCATTATGATCTTGCTGGTGCTGGAATCAAAGCAAGAAATGATGTAGTGAAGATCCTTATGGAGGCTCATCCTGAATTGTCAATGACTGTTGATCCATCGAACGCCACGGCTTTGCACACGGCTGCAACACAAGGTCACATTGAGATTGTGAAGTTTCTGATGGAAGAAGAAGGAAGTAGCCTTGTAAGCATTGCCAAGAGCAATGGGAAAACCACTTTGCATTCTTCTGCAAGGAATGGACACTTGGAGGTTGTGAGAGCGCTTCTTGAGCAGGATGTTGGGCTCGCCACGAGAACCGATAAGAAGGGCCAGACGGCGCTTCACATGGCGGTGAAGGGACAGAGTCTTGAGGTGGTGGAGGAGCTGATCAAAACAGCTCCCTCATCAATAAACATGGTTGATAATAAGGGAAACACAGCATTGCATATTGCAACCAGGAAGGGCAGGGATCAGATTGTAAAGAAGCTTCTTGAACATAAAGAAACGGACAAATCTATAATCAACAAATCCGGTGAGAGTGCGATAGACACAGCAGAGAAAAGTGGGAACAACAATAATGTCAAAGAAATTCTTGTAGAACAAGGAGTTCAGAGCGCCAAAGCCATAAAGGCACATGGAGGAACTACACAAGCTACAACACGTGAGTTGAAACAAACCGTGAGTGACATAAAGCACGAGGTCCATCACCAATTGGAACACACTCGTCAGACCCGAAAACGAGTCCAAGGCATCGCCAAGCGCATCAACAAGATGCACGCCGAAGGCCTAGACAATGCAATAAACTCCACAACCGTCGTGGCGGTACTAATAGCCACCGTCGCCTTCGCCGCCATATTCACGGTCCCTGGCCAATTCGTGGACGATCCAGATCATATTCCAGAAGGGATGACGCTAGGTGAAGCAAACATTGCTCCACAATTGCCGTTCATAATATTCTTTATATTCAATTCAATTGCGCTTTTTATCTCTCTTGCTGTGGTTGTGGTTCAAACCTCTATTGTGGTTATAGAGAGTAAAGCGAAGAAGCAAATGATGGCTATAATTAACAAGCTAATGTGGCTGGCTTGTGTGCTTGTTTCGGTGGCATTCTTAGCATTGTCGTTTATTGTTGTTGGGAAGGAAGAGAAATGGTTGGCCATTTGGGTCACTGTAATAGGGGCAACCATAATGGCCACCACGTTGGGGACTATGCTTTATTGGGTCATTAAGCATCGCATTGCGGCCTCCAATTTGAGGAGCATGAGGAAATCTTCCATGGAAAGCAACAGGTCAAAGTCTTGTTCAATGACGGCTTTATCTGACTCTGAGCTACTAAACAGTCAGTTTAAGAGAATGTATGCGATTTAG 1605 0.4542 MASSQAVHQIATPRKKMTKPLTGKRDDTALHSAARTGNLAVLRDILSGTEEDELLEILKRQNQDGETALYVAAEYGYVDVVREMIHHYDLAGAGIKARNDVVKILMEAHPELSMTVDPSNATALHTAATQGHIEIVKFLMEEEGSSLVSIAKSNGKTTLHSSARNGHLEVVRALLEQDVGLATRTDKKGQTALHMAVKGQSLEVVEELIKTAPSSINMVDNKGNTALHIATRKGRDQIVKKLLEHKETDKSIINKSGESAIDTAEKSGNNNNVKEILVEQGVQSAKAIKAHGGTTQATTRELKQTVSDIKHEVHHQLEHTRQTRKRVQGIAKRINKMHAEGLDNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPDHIPEGMTLGEANIAPQLPFIIFFIFNSIALFISLAVVVVQTSIVVIESKAKKQMMAIINKLMWLACVLVSVAFLALSFIVVGKEEKWLAIWVTVIGATIMATTLGTMLYWVIKHRIAASNLRSMRKSSMESNRSKSCSMTALSDSELLNSQFKRMYAI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1853 534 ProSiteProfiles Ankyrin repeat region circular profile. 222 245 - -
Aev10g1853 534 ProSiteProfiles Ankyrin repeat profile. 222 245 IPR002110 GO:0005515
Aev10g1853 534 Gene3D - 5 181 IPR036770 -
Aev10g1853 534 ProSiteProfiles Ankyrin repeat profile. 119 141 IPR002110 GO:0005515
Aev10g1853 534 ProSiteProfiles Ankyrin repeat profile. 154 186 IPR002110 GO:0005515
Aev10g1853 534 Gene3D - 182 282 IPR036770 -
Aev10g1853 534 SMART ANK_2a 188 218 IPR002110 GO:0005515
Aev10g1853 534 SMART ANK_2a 25 54 IPR002110 GO:0005515
Aev10g1853 534 SMART ANK_2a 119 148 IPR002110 GO:0005515
Aev10g1853 534 SMART ANK_2a 64 93 IPR002110 GO:0005515
Aev10g1853 534 SMART ANK_2a 222 252 IPR002110 GO:0005515
Aev10g1853 534 SMART ANK_2a 154 183 IPR002110 GO:0005515
Aev10g1853 534 SUPERFAMILY Ankyrin repeat 27 276 IPR036770 -
Aev10g1853 534 ProSiteProfiles Ankyrin repeat profile. 188 210 IPR002110 GO:0005515
Aev10g1853 534 ProSiteProfiles Ankyrin repeat region circular profile. 64 87 - -
Aev10g1853 534 PANTHER ANKYRIN REPEAT PLANT PROTEIN 8 534 - -
Aev10g1853 534 Pfam Ankyrin repeats (3 copies) 25 87 IPR002110 GO:0005515
Aev10g1853 534 Pfam Ankyrin repeats (3 copies) 154 218 IPR002110 GO:0005515
Aev10g1853 534 Pfam Ankyrin repeats (3 copies) 220 282 IPR002110 GO:0005515
Aev10g1853 534 Pfam Ankyrin repeats (3 copies) 99 145 IPR002110 GO:0005515
Aev10g1853 534 ProSiteProfiles Ankyrin repeat region circular profile. 154 176 - -
Aev10g1853 534 ProSiteProfiles Ankyrin repeat region circular profile. 188 210 - -
Aev10g1853 534 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 8 534 - -
Aev10g1853 534 ProSiteProfiles Ankyrin repeat region circular profile. 119 141 - -
Aev10g1853 534 MobiDBLite consensus disorder prediction 1 27 - -
Aev10g1853 534 Pfam Domain of unknown function 340 456 IPR026961 -
Aev10g1853 534 ProSiteProfiles Ankyrin repeat profile. 64 100 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1853 Aev-Chr10 20160088 20162287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1853 13 534 Miscellaneous Gene Families AT1G07710 68.284 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1853 - - gmx:100779230 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1853 10 20160088 20162287 Aev10g1853 10 20160088 20162287 ECH
Aev10g1853 10 20160088 20162287 Aev04g3082 04 30567660 30570678 ECH