Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3082 ATGGCCACCACACCAATGGTGCAGCAGCAGCAACAAGCTGCCTCAGTAGCAAGCACTCCTAGGAAGAAAATGACCAAACAATTGACCGGTAAGCGCGACGACACGGCCTTGCACTCGGCAGCTAGGGCTGGAAAATTGGATGTGATTAAGGACACAATTTCTGGTGCTGCTGATGAGACTCAACTGCATGAGTTGTTGGCGAAGCAGAACCAAGCAGGGGAAACACCACTTTATGTTGCTGCTGAGTATGGTTATGTTGAATTGGTTAGGGAGATGATTCAGTATTATGATCTTGCTGATGCTGGGATTAAGGCAAGGAATGGTTTTGATGCACTTCACATTGCTGCCAAACAAGGGGATTTAGATGTGCTGAAGATCCTTATGGAGGCTCATCCCGAATTGTCGATGACTGTGGATCCATCCAACACCACTGCTTTGCACACAGCTGCAACACAAGGCCACACTGAGATTGTGAAGTTTCTTTTGGAGGCAGGTAGCAGCTTGGCAACCATAGCCAGAAGTAACGGGAAGACGGCTTTGCATTCTGCGGCAAGAAATGGACATTTGGAGGTCTTGAAAGCGCTTCTGGAGAAGGAGCCTACGGTTGTGACACGGACCGATAAGAAAGGACAGACTGCCCTTCACATGGCAGTGAAGGGACAAAGTCTTGTGGTGGTCGAGGAGTTGATAAAAGCCGAGCCGTCGTCCGTAAACATGGTTGATAACAAGGGTAACACACCACTGCACATAGCAACCAGAAAGTGCAGAGCTCAGATTGTTAAGTTGCTTCTTGGACAGACAGAAACAGACACCACAGTGGTTAATAGATCCGGTGAAAGCGCGTTGGACACGGCTGAGAAAACCGGGAACTCTGATGTCAAAGCCATTCTGCTGGAACACGGTGTTCAAAGTGCCAAAGCCATGAAGCCTCAGCCAACAACAGCAGCGCGCGAGTTGAAACAAACCGTGAGTGACATAAAGCATGAAGTTCATCACCAACTTGAACACACGCGCCAGACCAGAAAACGTGTCCAAGGCATCGCAAAACGCATCAACAAGATGCACGCCGAAGGGCTAAACAACGCGATCACCTCCACAACTGTGGTTGCGGTCCTCATTGCCACGGTCGCCTTCGCTGCTATCTTCACAGTTCCTGGCCAATTTGTTGATGATCCAAAAGATGTCCCTTCAGGGATGTCCCTTGGTGAAGCAAATATAGCCCCGCAAGCGCCATTCATCATTTTCTTCATCTTCGATTCTGTCGCCCTCTTCATTTCTCTAGCCGTCGTCGTGGTTCAAACTTCAGTAGTTGTGATAGAGAGCAAAGCAAAGAAGCAAATGATGGCAATCATTAACAAGTTAATGTGGTTGGCTTGTGTTCTCATTACTGTGGCATTCTTGGCACTATCATTCATAGTTGTGGGGAAGGATCAGAAATGGCTTGCAATTGGAGTCACAATTATTGGAACAACTATAATGGCCACAACATTGGGAGTTATGTGTTATTGGGTCATTAGGCACAGAATTGAAGCCTCTAATTTGAGGAGTTTAAGGAAATCTTCATTGGGAAGCAGGTCAAGGTCTTTTTCAGCTTCTGTTATGTCAGATTCTGAGCTACTTAACAATGAGTTAAAGATAATGTATGCGATTTAG 1653 0.4688 MATTPMVQQQQQAASVASTPRKKMTKQLTGKRDDTALHSAARAGKLDVIKDTISGAADETQLHELLAKQNQAGETPLYVAAEYGYVELVREMIQYYDLADAGIKARNGFDALHIAAKQGDLDVLKILMEAHPELSMTVDPSNTTALHTAATQGHTEIVKFLLEAGSSLATIARSNGKTALHSAARNGHLEVLKALLEKEPTVVTRTDKKGQTALHMAVKGQSLVVVEELIKAEPSSVNMVDNKGNTPLHIATRKCRAQIVKLLLGQTETDTTVVNRSGESALDTAEKTGNSDVKAILLEHGVQSAKAMKPQPTTAARELKQTVSDIKHEVHHQLEHTRQTRKRVQGIAKRINKMHAEGLNNAITSTTVVAVLIATVAFAAIFTVPGQFVDDPKDVPSGMSLGEANIAPQAPFIIFFIFDSVALFISLAVVVVQTSVVVIESKAKKQMMAIINKLMWLACVLITVAFLALSFIVVGKDQKWLAIGVTIIGTTIMATTLGVMCYWVIRHRIEASNLRSLRKSSLGSRSRSFSASVMSDSELLNNELKIMYAI* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3082 550 ProSiteProfiles Ankyrin repeat region circular profile. 72 94 - -
Aev04g3082 550 ProSiteProfiles Ankyrin repeat region circular profile. 243 264 - -
Aev04g3082 550 ProSiteProfiles Ankyrin repeat region circular profile. 141 168 - -
Aev04g3082 550 PANTHER ANKYRIN REPEAT PLANT PROTEIN 13 550 - -
Aev04g3082 550 ProSiteProfiles Ankyrin repeat profile. 175 207 IPR002110 GO:0005515
Aev04g3082 550 Gene3D - 171 344 IPR036770 -
Aev04g3082 550 SMART ANK_2a 175 205 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 243 273 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 141 170 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 209 239 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 107 136 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 277 307 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 72 101 IPR002110 GO:0005515
Aev04g3082 550 SMART ANK_2a 32 61 IPR002110 GO:0005515
Aev04g3082 550 ProSiteProfiles Ankyrin repeat profile. 72 94 IPR002110 GO:0005515
Aev04g3082 550 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 13 550 - -
Aev04g3082 550 ProSiteProfiles Ankyrin repeat region circular profile. 107 129 - -
Aev04g3082 550 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g3082 550 Pfam Ankyrin repeats (3 copies) 175 238 IPR002110 GO:0005515
Aev04g3082 550 Pfam Ankyrin repeats (3 copies) 102 168 IPR002110 GO:0005515
Aev04g3082 550 Pfam Ankyrin repeats (3 copies) 23 95 IPR002110 GO:0005515
Aev04g3082 550 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Aev04g3082 550 ProSiteProfiles Ankyrin repeat profile. 107 139 IPR002110 GO:0005515
Aev04g3082 550 ProSiteProfiles Ankyrin repeat profile. 243 264 IPR002110 GO:0005515
Aev04g3082 550 ProSiteProfiles Ankyrin repeat region circular profile. 175 198 - -
Aev04g3082 550 MobiDBLite consensus disorder prediction 1 36 - -
Aev04g3082 550 Gene3D - 3 170 IPR036770 -
Aev04g3082 550 Pfam Ankyrin repeat 244 265 IPR002110 GO:0005515
Aev04g3082 550 SUPERFAMILY Ankyrin repeat 36 302 IPR036770 -
Aev04g3082 550 Pfam Domain of unknown function 357 473 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3082 Aev-Chr4 30567660 30570678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3082 7 550 Miscellaneous Gene Families AT1G07710 71.507 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3082 - - gmx:100779230 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3082 04 30567660 30570678 Aev04g3082 04 30567660 30570678 ECH
Aev10g1853 10 20160088 20162287 Aev04g3082 04 30567660 30570678 ECH