Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1828 ATGGGAGACACAGTGGATTGTTCTAAATTGAACAGTGGGAAAAGAGCGTATAAAATATCATTGATTGCATCTCGCCCTAAATGTTTTGCATTGAGATATCAACACCTTGTTTCTCTGGTCCATGGTGACTTTGGAACTAGTGCTGTGGGTCGTATCACATTTTTTGCGCTTAAAGTTGCTGCTTTAGAGATCATAAGAAGGTTCTCCAGAAACAGATGTCCATTTGTATGGAAAGGCCTTCAGGCACTACAAATCCTTTGTTATCCGCCATTCAAATGGATTCAGAGGTGGGCACCCTTCAAGGGTTTGGTTCAAAGCACGCAGGTCCTATCAAGACCATTACTAGCCCTTTCAATTGCAACGATTTTCTCTGACCTGTCAGAATGTAGTAATGGAAAGTCGGATTCATCGAATGTGCAGGCTGATATGAATACACGTCAGTGTTTGACAGATTCTGAAATATTGGACTCTGAATATTGGTTTACTCAATTCAAGCAAGACCTTGAAAATCAATGTATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCGTAGATTTTACACAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACGATACAATGGCGAGAGACTTACAGAATTCTTACTAAAGAAGAGCTGAAAATGTGGTCAAAAATTGTGTTCTGGCATGGATTTGATGTTTTGCGCAGACCATGCCTCATTGTAAGGCTTGGGCTAGCTTGCAGTACATTGAGATCTGAAGATAGACCTCGATTTGCTCAGGCAGTTGTTTCACAGGTAGAACATGGAGTCTTGCACTTGGTTGATGCAGACAACTCTCGAATTACCGTGTTAGTGGACTGTGAAGGGTTGTCTTCGTCGAGAATTCCCATGCAAGTGATGAGATCTTGTTGTTCCCATCTGCAAGACCACTTTCCTGATCGTCTTGGTAATTTGTTTGTCATAAGACTACCAGCAGTTGTTAATGTGACTGCCCAGAATTTTATTCAGGGTTTGAAGCCTGCAACTAGGAAAAAGTTGAAAATAGAAGGTGATATGGATCAGAGAGTTCTTTCTGACTATCTACGGAGACTTCCGTCATATCTTGGAGGCTACTGTTCTTGCATGAAATGCTCTGAATTTTGCAACCGTGGTATGCCGCAACCTCATACAACAGGGACCAGCAGGATGGAGATGGAGGATATCAGTGACAATGAAGATTCTCCATCATTGCATCTTTCCAATGAATTAGAAGGCCAAGCATGTGGTAGATATAACCAGATGTTGAGAAGTGCTGTCATAGGTGTACTCATATTTTGGGTTTTCATAGCTCTTGGCTTTGTTATATACGATGCTGGTAGTAGTCATGATTTGCCCTCATAA 1383 0.4121 MGDTVDCSKLNSGKRAYKISLIASRPKCFALRYQHLVSLVHGDFGTSAVGRITFFALKVAALEIIRRFSRNRCPFVWKGLQALQILCYPPFKWIQRWAPFKGLVQSTQVLSRPLLALSIATIFSDLSECSNGKSDSSNVQADMNTRQCLTDSEILDSEYWFTQFKQDLENQCISLPERINDDELRRFYTASNNDFSCFLTSIKKTIQWRETYRILTKEELKMWSKIVFWHGFDVLRRPCLIVRLGLACSTLRSEDRPRFAQAVVSQVEHGVLHLVDADNSRITVLVDCEGLSSSRIPMQVMRSCCSHLQDHFPDRLGNLFVIRLPAVVNVTAQNFIQGLKPATRKKLKIEGDMDQRVLSDYLRRLPSYLGGYCSCMKCSEFCNRGMPQPHTTGTSRMEMEDISDNEDSPSLHLSNELEGQACGRYNQMLRSAVIGVLIFWVFIALGFVIYDAGSSHDLPS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1828 460 SUPERFAMILY CRAL/TRIO domain 225 377 IPR036865 -
Aev10g1828 460 CDD SEC14 217 372 IPR001251 -
Aev10g1828 460 Gene3D - 157 409 IPR036865 -
Aev10g1828 460 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 217 377 IPR001251 -
Aev10g1828 460 Pfam CRAL/TRIO domain 224 371 IPR001251 -
Aev10g1828 460 MobiDBLite consensus disorder prediction 392 411 - -
Aev10g1828 460 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 6 453 - -
Aev10g1828 460 SMART sec14_4 221 374 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1828 Aev-Chr10 20020981 20023622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1828 - - gmx:100786215 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1828 10 20020981 20023622 Aev10g1828 10 20020981 20023622 ECH
Aev10g1828 10 20020981 20023622 Aev04g3121 04 30858197 30862382 PCT