Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3121 ATGATTCGCGACTGTGACGTAACTCTGAAACTGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGAGAAGAAGAAGCTTTCTGTGTCATCGCCGAAACAATCAACAAGACAGACCGATCCATCGGTCTCCGTGATCCATTCCGAAGATACATTGACCTATCATCAATTTACATGGGAGAGAGGGTGGAAGGTTCTAAGTTGAGCATGAGCTCTAAACCAAACAATGCCATCAGTGGGAAAAAGGCGTACAAAAAGCCACTGGTTGCATCACGCCCTAAAGGTTTTGCTCACAAAAACTATGAACACCTTGTTTCGATGACCCGTGGTGGATTTGCAAGCAGTGGTGTGGGTCGTGTCACATTCTTTTTGCTTAAAGTTGCTGCATTAGAGGCTGTAAGGAGGATATCCAAGAGTAGATGTCCATGTGTTTGGCGAGGGATACAGGGTCTACAAATCCTTGTCTGTCCACCATTTAAATGGATTCAGAGGTGGGCACCCTTCAAGGGTTTGGTCAACAGCATGGAGGTTCTTTCGAAACCATTACTAGTCCTTTCGATTGCAACAGTGTTTACCGACCAATCACAATTTAGTGATGGAACGTCAGAGGGTATTACTGATTCCCAAGATTCAGAAGTATCTTCAGAACAGTCTCATGTGCAGGGAAATTCGAATACAAGTCAATGTGAGAGAACCCCTAAAGTTTTAGAAAATGAAAACTGGTTGATTCGACTCAAGCAAGAGTTGGAAAATCAAGGGATCAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCGCAGATTTTACTCAGCTTCTAATAATGACTTTTCATGCTTCCTAACCTCAATCAAGAAGACAATACAATGGCGTGAGAGTTACAGAATCTTTTCCAAGGAAGAGCTGGAAATTTGGTCAAATATGGTGTTCTGGCATGGATTTGATGTGATGCACAGACCTTGCCTTATTGTAAGACTTGGGCTAGCTTGCAGCTCTTTGGCAAGTCGAGATAGACCTCGATTTGCTCAGGCAATCATATCACAGGTCGAATATGGAGTCTTGTACTTGGTTGATACAGATAACCCTCAGATTACGGTATTGGTGGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGAAAACCCTGAAATCCTGTTCTTCCCTTTTGCAAGATCACTTCCCTAATCGTCTTGGTGGTTTGTTTGTAATTCGACTTCCTCCAGTTGTTCGTGTTATTGCTCAGACATTTATTAAGGTTTTGAAGCTGACTACTAGGAAAAAGTTGAAAATAGAAGGAGAGATGTATCTGAAAGTTCTTAATGATAATCTGTCGACATTACCATCATATCTTGGAGGCTGCTGCACTTGCTCGGAATGTTCTAGAATTGGCAAGTCGGATGCTCGCCAACCTCGTGCAACCGGGACCAGCAGGATGGATAGGCAGCCAGGTACGGGTGACAATATGGAGGATTCTCCTTCGGTTTATGCATCAAATGACTTGGATGGCCGCCAAAACAGTAATTATGACAATGTGTTAAGAGCAGGTATCATAAGTGTTATCGTATTTTGGGTTTTAATAGCTCTTGCTGCTGGAATATACAATCCTGGTGGTAGTCGTGATTTGGCTCCAATAATGTAA 1632 0.4271 MIRDCDVTLKLKKKKKKKRRREEEAFCVIAETINKTDRSIGLRDPFRRYIDLSSIYMGERVEGSKLSMSSKPNNAISGKKAYKKPLVASRPKGFAHKNYEHLVSMTRGGFASSGVGRVTFFLLKVAALEAVRRISKSRCPCVWRGIQGLQILVCPPFKWIQRWAPFKGLVNSMEVLSKPLLVLSIATVFTDQSQFSDGTSEGITDSQDSEVSSEQSHVQGNSNTSQCERTPKVLENENWLIRLKQELENQGISLPERINDDELRRFYSASNNDFSCFLTSIKKTIQWRESYRIFSKEELEIWSNMVFWHGFDVMHRPCLIVRLGLACSSLASRDRPRFAQAIISQVEYGVLYLVDTDNPQITVLVDCEGLSPLRIPMKTLKSCSSLLQDHFPNRLGGLFVIRLPPVVRVIAQTFIKVLKLTTRKKLKIEGEMYLKVLNDNLSTLPSYLGGCCTCSECSRIGKSDARQPRATGTSRMDRQPGTGDNMEDSPSVYASNDLDGRQNSNYDNVLRAGIISVIVFWVLIALAAGIYNPGGSRDLAPIM* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3121 543 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 308 456 IPR001251 -
Aev04g3121 543 MobiDBLite consensus disorder prediction 195 227 - -
Aev04g3121 543 Gene3D - 234 478 IPR036865 -
Aev04g3121 543 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 68 533 - -
Aev04g3121 543 SMART sec14_4 300 453 IPR001251 -
Aev04g3121 543 Pfam CRAL/TRIO domain 304 450 IPR001251 -
Aev04g3121 543 MobiDBLite consensus disorder prediction 464 499 - -
Aev04g3121 543 CDD SEC14 296 450 IPR001251 -
Aev04g3121 543 SUPERFAMILY CRAL/TRIO domain 303 455 IPR036865 -
Aev04g3121 543 MobiDBLite consensus disorder prediction 467 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3121 Aev-Chr4 30858197 30862382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3121 - - lang:109355367 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3121 04 30858197 30862382 Aev04g3121 04 30858197 30862382 ECH
Aev10g1828 10 20020981 20023622 Aev04g3121 04 30858197 30862382 PCT