Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1820 ATGCCAACAACACAAAGCCACCTTCTTCTCTCCTGGGGAAGGTGGCGCAGCCTAAGCAGAGCAGAGGTGAAACTCTGTCAAAAACCATTTCCACCTCTTTCCCCTCAAGTCTCTCACATGGGTCAGGGACTCAGCTGCAGGGGCAGCCATGAACACGGGCTATTCACTGCCGTGCAGCACGGTGACCTTCAAACCGTGACAGACCTGTTAGAGGAAGACCCTTCTCTCATTCACCACACCACTGTCTATGATCGCCACTCTCCTCTTCATATTGCCGCTGCCAATGGCCACTTCCAGATTCTATCGAGGCTTTTAGATGGATCTGTTAACCCAGATGTGTTGAATCGCCAAAAGCAGACTCCGCTTATGTTGGCAGCAATGCACGGGAAGATCGCCTGTGTGGAGAAGCTCCTTCAAGCTGGGGCCAATGTATTGATGTTTGATTCTGTTTGTGGAAGAACATGCTTGCACTATTCAGCATACTATGGCCATTCTTCTTGTCTTAAAGCAATTCTTTCTGCTGCTCAATCTAGTCCCGTGGCTGCTTCTTGGGGATTTGCTCGGTTTGTGAATATTAGAGATGGGAAAGGTGCAACGCCATTGCACTTAGCGGCTCGTCAAAGACGGCCTGAATGTGTACGTATTCTGTTAGACAGTGGAGCCCTTGTTTGTGCTTCAACTGGTGGATATGGATGTCCCGCGAGCACTCCTCTCCATCTTGCAGCTAGAAGTGGATCGCTCGATTGCATCCGTGAACTATTGGCATGGGGTGCGGATCGTCTTCAACGTGATTCTTCTGGGCGGATACCATATCTTGTTGCTCTGAAACACAGACATGGAGCATGTGCATCACTGCTAAATCCTACGTCTGCAGAGCCCCTTGTCTGGCCGTCTCCGTTGAAGTTCATCAGCGAGCTTAATCCTGAAGTGAAGGCTTTATTAGAGCAGGCCTTGATGGAAGCAAACAGAGAAAGGGAGAAACACATACTGAAGGGGAGTGCTTACTCTCTTCCATCTCCATCACATTCTGATGGGGCAGATGATGATATCTCCGAGATTAGCGAGTCAGCATTGTGCTGCATTTGCTTTGAGCAAGTATGCACAATTGAAGTCCAAAACTGTGGCCACCAGATGTGTGCACAATGCACACTAGCTCTTTGTTGCCACAACAAGCCGAACCCCACCACCGCTGCTCTCACGCCGCCAGTTTGTCCATTCTGTCGGAGCGCAATAGCCAGACTGGTGGCCGTGAAGATAGAAACTCACGACGAAGCCGATCAAGACAGCGTCGACGTCAATAGCTCCAAGCTAAGCAGCAAGTCAAGGAAACCAAGAAACATGAGCGACAGCGGTAGCAGTAGTTTCAAGGGGTTATCTGGTGTTAGTTCATTCGGAAAGTTGGGTAGCCGCAGCTCCGGAAGGATTGCTGCTGAGTGGATTGATGATAAAGAGTGA 1455 0.4983 MPTTQSHLLLSWGRWRSLSRAEVKLCQKPFPPLSPQVSHMGQGLSCRGSHEHGLFTAVQHGDLQTVTDLLEEDPSLIHHTTVYDRHSPLHIAAANGHFQILSRLLDGSVNPDVLNRQKQTPLMLAAMHGKIACVEKLLQAGANVLMFDSVCGRTCLHYSAYYGHSSCLKAILSAAQSSPVAASWGFARFVNIRDGKGATPLHLAARQRRPECVRILLDSGALVCASTGGYGCPASTPLHLAARSGSLDCIRELLAWGADRLQRDSSGRIPYLVALKHRHGACASLLNPTSAEPLVWPSPLKFISELNPEVKALLEQALMEANREREKHILKGSAYSLPSPSHSDGADDDISEISESALCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPTTAALTPPVCPFCRSAIARLVAVKIETHDEADQDSVDVNSSKLSSKSRKPRNMSDSGSSSFKGLSGVSSFGKLGSRSSGRIAAEWIDDKE* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1820 484 Pfam Ankyrin repeats (3 copies) 54 148 IPR002110 GO:0005515
Aev10g1820 484 Pfam Ankyrin repeats (3 copies) 151 222 IPR002110 GO:0005515
Aev10g1820 484 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Aev10g1820 484 Gene3D - 49 184 IPR036770 -
Aev10g1820 484 Gene3D - 185 331 IPR036770 -
Aev10g1820 484 SUPERFAMILY Ankyrin repeat 54 289 IPR036770 -
Aev10g1820 484 Coils Coil 311 331 - -
Aev10g1820 484 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT31, PUTATIVE-RELATED 40 482 - -
Aev10g1820 484 SMART ANK_2a 196 225 IPR002110 GO:0005515
Aev10g1820 484 SMART ANK_2a 84 113 IPR002110 GO:0005515
Aev10g1820 484 SMART ANK_2a 49 79 IPR002110 GO:0005515
Aev10g1820 484 SMART ANK_2a 233 262 IPR002110 GO:0005515
Aev10g1820 484 SMART ANK_2a 151 181 IPR002110 GO:0005515
Aev10g1820 484 SMART ANK_2a 117 146 IPR002110 GO:0005515
Aev10g1820 484 ProSiteProfiles Zinc finger RING-type profile. 359 408 IPR001841 -
Aev10g1820 484 ProSiteProfiles Ankyrin repeat profile. 196 228 IPR002110 GO:0005515
Aev10g1820 484 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 342 430 IPR013083 -
Aev10g1820 484 PANTHER HOMEOBOX PROTEIN WARIAI 40 482 - -
Aev10g1820 484 Pfam Ankyrin repeats (many copies) 234 274 IPR002110 GO:0005515
Aev10g1820 484 ProSiteProfiles Ankyrin repeat region circular profile. 233 259 - -
Aev10g1820 484 SUPERFAMILY RING/U-box 352 413 - -
Aev10g1820 484 MobiDBLite consensus disorder prediction 425 471 - -
Aev10g1820 484 ProSiteProfiles Ankyrin repeat profile. 84 116 IPR002110 GO:0005515
Aev10g1820 484 ProSiteProfiles Ankyrin repeat region circular profile. 196 221 - -
Aev10g1820 484 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Aev10g1820 484 ProSiteProfiles Ankyrin repeat region circular profile. 84 116 - -
Aev10g1820 484 ProSiteProfiles Ankyrin repeat profile. 233 265 IPR002110 GO:0005515
Aev10g1820 484 MobiDBLite consensus disorder prediction 431 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1820 Aev-Chr10 19979173 19983885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1820 51 264 Miscellaneous Gene Families AT3G12360 32.579 3.88e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1820 - - gmx:100786708 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1820 10 19979173 19983885 Aev10g1820 10 19979173 19983885 ECH
Aev10g1820 10 19979173 19983885 Aev04g3131 04 30946846 30949563 PCT