Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3131 ATGGGTCAGGGGCTGAGTTGCAGAGGAAGCAATGAGCATGGCTTGTTCCGTGCAGTGCAGCATGGAGACATTGAAACTGTTGCTACTCTGCTTCACACTCACCCTTCTCTCATGCACCACTCCACTGTCTATGATCGCCACTCTCCTCTTCATATTGCCGCTGCTAATGGCCAGATCCAGATTCTGTCTAGGCTTTTAGATGGATCTGTGAATCCAGATGTTTTGAATCGCCAAAAGCAGACTCCGCTTATGTTGGCAGCAATGCACGGCAAGATCGCTTGTGTGGAAAAGCTCCTTGAAGCCGGTGCTAATGTGTTAATGTTTGATGCTAATTATGGAAGAACCTGCTTGCACTATGCTGCTTATTATGGCCATTCCTCTTGCCTTAAGGCAATTCTTTCTGCTGCTCAATCTAGTCCAGTGGCTGCTTCTTGGGGTTTTGCTAGATTTGTGAATATTAGAGATGGTAGGGGGGCAACACCGCTGCACTTGGCGGCACGACAAAGGCGAGCTGAATGTGTACATATTCTATTAAACAGTGGAGCTCTTGTTTGTGCTTCAACTGGCAGATATGGTTGTCCTGGGAGCACTCCTCTTCATTTAGCAGCTAGAGCAGGGTCTCTCGATTGCATTCGGAAGCTGTTGGCATGGGGCGCGGATCGCCTCCAACGCGATGTATCTGGGCGGATACCATATCTAGTTGCTCTAAAACACAGGCACGGCGCGTGTGCTGCGTTGCTGAATCCTACATCTGCGGAGCCTCTAGTTTGGCCATCACCTTTGAAGGTCATCAGTGAGCTTAATCCGGAGGCCAAAGCACTACTCGAGCAGGCCTTGATGGATGCAAACAGGGAAAGGGAGAAAAACATATTGAAGGGAAGTTCTTACTCTCTTCCATCTCCATCACACTCTGATGGGCAAGATGACAATATCTCTGAGGTAAGTGAGACAGAATTGTGCTGCATCTGCTTTGAGCAGATATGCACAATTGAAGTCCAGAACTGTGGTCACCAGATGTGTGCACAATGCACACTAGCACTCTGTTGCCACAACAAGCCCAACCCGGCTACCGCTTCCCTTTCCCCGCCACTCTGTCCGTTCTGCCGGAGCACCATAGCCAGGCTGGCAGTCATCAAGATAGAAAGCCACGAAGAAGTTGATCAAGACTGTGTAGACATCAGTTGTTCCATGCCGAGCAAGTCAAGGAAGTCACGAAACTTCAGCGAGGTCGGTAGCAGTAGTCTGAAAGGGTTATCCACCGTTGGACCATTCGGGAAGATGGGCGGCCGTAGTTCCGGAAGAGTCGCCACGGAAAATGAGTGGGCTGATAACAAACAACAGTGA 1344 0.497 MGQGLSCRGSNEHGLFRAVQHGDIETVATLLHTHPSLMHHSTVYDRHSPLHIAAANGQIQILSRLLDGSVNPDVLNRQKQTPLMLAAMHGKIACVEKLLEAGANVLMFDANYGRTCLHYAAYYGHSSCLKAILSAAQSSPVAASWGFARFVNIRDGRGATPLHLAARQRRAECVHILLNSGALVCASTGRYGCPGSTPLHLAARAGSLDCIRKLLAWGADRLQRDVSGRIPYLVALKHRHGACAALLNPTSAEPLVWPSPLKVISELNPEAKALLEQALMDANREREKNILKGSSYSLPSPSHSDGQDDNISEVSETELCCICFEQICTIEVQNCGHQMCAQCTLALCCHNKPNPATASLSPPLCPFCRSTIARLAVIKIESHEEVDQDCVDISCSMPSKSRKSRNFSEVGSSSLKGLSTVGPFGKMGGRSSGRVATENEWADNKQQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3131 447 Gene3D - 146 197 IPR036770 -
Aev04g3131 447 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Aev04g3131 447 ProSiteProfiles Ankyrin repeat region circular profile. 78 105 - -
Aev04g3131 447 Gene3D - 7 145 IPR036770 -
Aev04g3131 447 ProSiteProfiles Ankyrin repeat profile. 157 189 IPR002110 GO:0005515
Aev04g3131 447 Pfam Ankyrin repeat 112 134 IPR002110 GO:0005515
Aev04g3131 447 Pfam Ankyrin repeat 158 185 IPR002110 GO:0005515
Aev04g3131 447 SUPERFAMILY RING/U-box 314 373 - -
Aev04g3131 447 ProSiteProfiles Ankyrin repeat region circular profile. 194 220 - -
Aev04g3131 447 SMART ANK_2a 112 142 IPR002110 GO:0005515
Aev04g3131 447 SMART ANK_2a 78 107 IPR002110 GO:0005515
Aev04g3131 447 SMART ANK_2a 157 186 IPR002110 GO:0005515
Aev04g3131 447 SMART ANK_2a 10 39 IPR002110 GO:0005515
Aev04g3131 447 SMART ANK_2a 45 74 IPR002110 GO:0005515
Aev04g3131 447 SMART ANK_2a 194 223 IPR002110 GO:0005515
Aev04g3131 447 ProSiteProfiles Ankyrin repeat profile. 194 226 IPR002110 GO:0005515
Aev04g3131 447 PANTHER HOMEOBOX PROTEIN WARIAI 1 443 - -
Aev04g3131 447 Pfam Ankyrin repeats (3 copies) 15 109 IPR002110 GO:0005515
Aev04g3131 447 ProSiteProfiles Ankyrin repeat profile. 45 77 IPR002110 GO:0005515
Aev04g3131 447 ProSiteProfiles Ankyrin repeat region circular profile. 157 182 - -
Aev04g3131 447 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT31, PUTATIVE-RELATED 1 443 - -
Aev04g3131 447 Pfam Ankyrin repeats (many copies) 194 235 IPR002110 GO:0005515
Aev04g3131 447 MobiDBLite consensus disorder prediction 399 419 - -
Aev04g3131 447 SUPERFAMILY Ankyrin repeat 15 250 IPR036770 -
Aev04g3131 447 ProSiteProfiles Zinc finger RING-type profile. 320 369 IPR001841 -
Aev04g3131 447 ProSiteProfiles Ankyrin repeat region circular profile. 45 77 - -
Aev04g3131 447 MobiDBLite consensus disorder prediction 399 447 - -
Aev04g3131 447 Gene3D - 198 251 IPR036770 -
Aev04g3131 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 300 378 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3131 Aev-Chr4 30946846 30949563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3131 48 247 Miscellaneous Gene Families AT5G02620 29.808 1.19e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3131 - - gmx:100800611 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3131 04 30946846 30949563 Aev04g3131 04 30946846 30949563 ECH
Aev10g1820 10 19979173 19983885 Aev04g3131 04 30946846 30949563 PCT