Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1740 ATGGTTAGTCCCAAGCTCGCTCGCTCCCTCCAAATTGGAACTGCCAAAAACAGTAACATGTTGGTGGTTTCATGTTTGGGTTTTGGTCGAACCAGAATCTGCAACAACCACAACAATAACATCCTCCTCCTCATGTCTGCCACCGCATCATTCTCCACTTCTCAGCCTCAGCCTCAGCCAGAGTCCCAAGCTTGTGTGCTTGCCACTCCTCCTAGGAACAACAAGAGACCCAAAATTAGCGTCCAAACTCAAGAACCAAAGAAATTTGGCCCCACTGTGGTCGAAGGACTTGTTGGACACACAGGAGCAAATGAATTGGTTCAACGACGTAGTGAATCACCACCTGCCCACTGGGAAAAGGTGCTTGAAGGGATTCGCAAAATGAGTTGTTCTGCTTCAGATGCACCAACAGACTCTGTGGAATGTGACAATTCTGATGATTCTCTTCCTCCTAAGGAAAGAAGATTTGCTGTGCTGGCATCTTCTGTTTTATCAAGCCAAACTAAGGAGCATGTTACTCATGGAGCAACTCAACGTCTTCGGCAAAATGGTCTGCTTACTGCTGATGCAATCAACAAAGGTGATGAAGAAACCATTAAAAAGTTGATTTACCCGGTTGGGTTTTATACAAGAAAAGCCAGTAATTTGAAAAAAATTGCAAAGGTTTGTCTCATCAAGTATGATGGAGACATACCTAGCTCAATCGAGGAACTGCTGCTACTTCCAGGCGTTGGTCCTAAGATAGCTCATTTGGTTATGATTCTTGGATGGAACAATGTCCAAGGGATATGTGTAGATACTCATGTCCACCGCATTTGCAATAGGCTTGGATGGGTTTCAAGACCAGGCACAAAACAGAAAACTTCAACACCAGAAGAAACAAGAAAGGCGTTGCAGCAGTGGCTTCCAAAGGAAGAATGGGTTCCAATAAACCCTCTTTTGGTAGGTTTTGGAAGGACAATTTGTACTCCTTTGCGGCCTCACTGTGCAGAGTGTTGCATAAGTAGTTTGTGCCCATCAGCATTCAAGGAGACCAAGAACGCTTCCATCAAGTCTGGACTGAACAAGAAGCTATAA 1077 0.4466 MVSPKLARSLQIGTAKNSNMLVVSCLGFGRTRICNNHNNNILLLMSATASFSTSQPQPQPESQACVLATPPRNNKRPKISVQTQEPKKFGPTVVEGLVGHTGANELVQRRSESPPAHWEKVLEGIRKMSCSASDAPTDSVECDNSDDSLPPKERRFAVLASSVLSSQTKEHVTHGATQRLRQNGLLTADAINKGDEETIKKLIYPVGFYTRKASNLKKIAKVCLIKYDGDIPSSIEELLLLPGVGPKIAHLVMILGWNNVQGICVDTHVHRICNRLGWVSRPGTKQKTSTPEETRKALQQWLPKEEWVPINPLLVGFGRTICTPLRPHCAECCISSLCPSAFKETKNASIKSGLNKKL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1740 358 Pfam HhH-GPD superfamily base excision DNA repair protein 161 303 IPR003265 GO:0006284
Aev10g1740 358 MobiDBLite consensus disorder prediction 52 80 - -
Aev10g1740 358 CDD ENDO3c 156 318 IPR003265 GO:0006284
Aev10g1740 358 Gene3D - 256 344 IPR023170 -
Aev10g1740 358 Gene3D Hypothetical protein; domain 2 146 255 - -
Aev10g1740 358 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 113 347 - -
Aev10g1740 358 SMART ccc3 321 341 IPR003651 GO:0051539
Aev10g1740 358 SUPERFAMILY DNA-glycosylase 151 345 IPR011257 GO:0003824|GO:0006281
Aev10g1740 358 ProSitePatterns Endonuclease III family signature. 229 258 IPR004036 -
Aev10g1740 358 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 113 347 - -
Aev10g1740 358 MobiDBLite consensus disorder prediction 52 84 - -
Aev10g1740 358 Hamap Endonuclease III-like protein 1 [NTHL1]. 114 344 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Aev10g1740 358 SMART endo3end 164 320 IPR003265 GO:0006284
Aev10g1740 358 Pfam Helix-hairpin-helix motif 226 253 IPR000445 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1740 Aev-Chr10 19472819 19475004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1740 K10773 - gmx:100818398 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1740 10 19472819 19475004 Aev10g1740 10 19472819 19475004 ECH
Aev10g1740 10 19472819 19475004 Aev04g3243 04 31693474 31698323 PCT