Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3243 ATGCAGAAACAGAGTGGAATTCATGACATTGTTTCAGCTGGGAGTAGCAGAGTCAAGTCAGTTACTCCTTCTCCTCCTCGTTGGTTTGGTTTGGGGCGAATCAAATTCTTCATGTCTCAAACAACACCATCCCTTCCCTCCAATTCCAACAGCGACATACCCACTTCCATTCTTGATTCCTCGGAGTCCTCGCACGCTGCTTCAGTGTCCAAAGTTCGCGTCTTTATGAGGAGAAACAAGAGGGCCAAAACCAACGTGTCGCTTCAACAGAACAAGCTTCTGCCCCCATCACAGGACCACAACAAAAAGTCTGGCATACCTGAAATTGAAGATTTTGCATACAGAGGAGGAGCAAGTGAATTGACTCAATGTAGGAAATCGGAAACGGGCTCAGATGCGACTCTATTGGAAAGTGAAGTTACTTCTCCTGGAGCCAGCGGTGAATCACCTGCTCAGTGGGAAAAGGTGCTTGAGGGGATTCGCAAAATGAGGTGTTCTGCAGATGCACCGGTAGACACAATGGGATGTGAGAAAGCTGGTGATACTCTACCTCCTAAGGAAAGAAGATTTGCTGTCCTGGTATCTTCTCTTCTATCAAGCCAAACCAAGGATAATGTTACTCATGGAGCAATCCAACGTCTTCTCCAAAATGGACTACTTACTGCTGATGCAATCAACAATGCTGATGAAGAAACACTCAAAAAGATGATTTACCCGGTTGGCTTTTATACAACAAAAGCCAAGAACTTGAAGAAAATTGCAAATATTTGTCTCATGAAGTATGATGGAGACATACCTAGCACAATTGAGCAATTACTCTTACTTCCAGGCATAGGTCCTAAGATGGCTCACTTGGTTATGAATGTTGGATGGAACGATGTCCAAGGGATATGCGTAGATACTCATGTTCACCGGATTTGCAATCGGCTTGGGTGGGTGACTAGACCGGGCACAAAACAGAAAACTTTAACACCTGAAGAAACAAGAGAGGCACTGCAAAGATGGCTTCCAAGGGAAGAATGGGTTCCTATAAATCCTCTTTTGGTAGGATTTGGACAGACAATTTGCACTCCCTTAAGGCCCCGTTGTGGAGAATGTAGTATAAGTGAGTTGTGCCCTTCAGCATTCAAGGAGGCCCCAAACTCAAGCCCATCATCCAAGCCCAAAAGGTCTCGGGCTAGGCCTAACAAGAAGCATTAG 1200 0.4525 MQKQSGIHDIVSAGSSRVKSVTPSPPRWFGLGRIKFFMSQTTPSLPSNSNSDIPTSILDSSESSHAASVSKVRVFMRRNKRAKTNVSLQQNKLLPPSQDHNKKSGIPEIEDFAYRGGASELTQCRKSETGSDATLLESEVTSPGASGESPAQWEKVLEGIRKMRCSADAPVDTMGCEKAGDTLPPKERRFAVLVSSLLSSQTKDNVTHGAIQRLLQNGLLTADAINNADEETLKKMIYPVGFYTTKAKNLKKIANICLMKYDGDIPSTIEQLLLLPGIGPKMAHLVMNVGWNDVQGICVDTHVHRICNRLGWVTRPGTKQKTLTPEETREALQRWLPREEWVPINPLLVGFGQTICTPLRPRCGECSISELCPSAFKEAPNSSPSSKPKRSRARPNKKH* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3243 399 MobiDBLite consensus disorder prediction 126 148 - -
Aev04g3243 399 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 86 391 - -
Aev04g3243 399 SUPERFAMILY DNA-glycosylase 161 388 IPR011257 GO:0003824|GO:0006281
Aev04g3243 399 Pfam HhH-GPD superfamily base excision DNA repair protein 194 332 IPR003265 GO:0006284
Aev04g3243 399 SMART endo3end 198 354 IPR003265 GO:0006284
Aev04g3243 399 SMART ccc3 355 375 IPR003651 GO:0051539
Aev04g3243 399 MobiDBLite consensus disorder prediction 376 399 - -
Aev04g3243 399 Hamap Endonuclease III-like protein 1 [NTHL1]. 149 378 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Aev04g3243 399 Gene3D - 288 377 IPR023170 -
Aev04g3243 399 MobiDBLite consensus disorder prediction 126 151 - -
Aev04g3243 399 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 86 391 - -
Aev04g3243 399 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g3243 399 CDD ENDO3c 190 352 IPR003265 GO:0006284
Aev04g3243 399 ProSitePatterns Endonuclease III family signature. 263 292 IPR004036 -
Aev04g3243 399 Pfam Helix-hairpin-helix motif 260 288 IPR000445 GO:0003677
Aev04g3243 399 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g3243 399 Gene3D Hypothetical protein; domain 2 180 287 - -
Aev04g3243 399 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 356 372 IPR004035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3243 Aev-Chr4 31693474 31698323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3243 K10773 - gmx:100818398 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1740 10 19472819 19475004 Aev04g3243 04 31693474 31698323 PCT