Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1735 ATGGTGGAAGCATTCAACATCTTTGATCAGAACCGAGATGGCTTCATATCCGTTGATGAGTTGAGAGCAGTATTGTCCTCTCTGGGGCTGAAACAGGGGAGAACCGTTGATGATTGCAAGAAGATGATAATGAAGGTTGATGTTGATGGAGATGGCATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGTGGTGGATTCACTGCTCTCACTTAA 219 0.4384 MVEAFNIFDQNRDGFISVDELRAVLSSLGLKQGRTVDDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFTALT* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1735 72 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
Aev10g1735 72 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 71 - -
Aev10g1735 72 SMART efh_1 1 28 IPR002048 GO:0005509
Aev10g1735 72 SMART efh_1 38 66 IPR002048 GO:0005509
Aev10g1735 72 Gene3D - 1 65 - -
Aev10g1735 72 ProSiteProfiles EF-hand calcium-binding domain profile. 1 31 IPR002048 GO:0005509
Aev10g1735 72 ProSitePatterns EF-hand calcium-binding domain. 9 21 IPR018247 -
Aev10g1735 72 PRINTS Parvalbumin signature 9 25 - -
Aev10g1735 72 PRINTS Parvalbumin signature 46 59 - -
Aev10g1735 72 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Aev10g1735 72 SUPERFAMILY EF-hand 2 65 IPR011992 -
Aev10g1735 72 PANTHER CALMODULIN-LIKE PROTEIN 7 1 71 - -
Aev10g1735 72 Pfam EF-hand domain pair 3 64 IPR002048 GO:0005509
Aev10g1735 72 CDD EFh 3 64 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1735 Aev-Chr10 19442834 19443052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1735 4 71 EF-hand Containing Proteins AT3G07490 83.824 1.61e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1735 K13448 - qsu:112002913 132.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1735 10 19442834 19443052 Aev10g1735 10 19442834 19443052 ECH
Aev10g1735 10 19442834 19443052 Aev04g3251 04 31772787 31773224 PCT