Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3251 ATGTTTGATCGGAACGGCGACGGCCGGATCTCCAAAAAAGAATTAAATGACTCCCTAGAGAAGTTGAGGATCTTCATCCCGGACGTAGAGTTAACACAAATGATAGAGAAAATCGACGTGAACGGCGACGGATGGGTGGACATGGACGAATTCGGGGAGCTATACCAATCAATAATGGAAGATCAGGAGAATCAAGAAGGGAGGGATGAGGAGGAAGACATGAGAGAAGCATTCAATGTGTTTGATCAAAATGGCGACGGTTTCATAACTGTGGAGGAGCTTAGGGCAGTGTTGGCATCTCTAGGGTTAAAGCAAGGGAGGACAACAGAGGAATGCAGAAAGATGATCATGAAGGTTGATGTTGATGGAGATGGAATGGTTAATTACATGGAATTCAAGCAAATGATGAAAGGTGGTGGATTCAGTGCCCTTGGTTAA 438 0.4475 MFDRNGDGRISKKELNDSLEKLRIFIPDVELTQMIEKIDVNGDGWVDMDEFGELYQSIMEDQENQEGRDEEEDMREAFNVFDQNGDGFITVEELRAVLASLGLKQGRTTEECRKMIMKVDVDGDGMVNYMEFKQMMKGGGFSALG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3251 145 ProSiteProfiles EF-hand calcium-binding domain profile. 107 142 IPR002048 GO:0005509
Aev04g3251 145 ProSiteProfiles EF-hand calcium-binding domain profile. 1 25 IPR002048 GO:0005509
Aev04g3251 145 Gene3D - 1 58 - -
Aev04g3251 145 Pfam EF-hand domain pair 1 56 IPR002048 GO:0005509
Aev04g3251 145 Pfam EF-hand domain pair 71 137 IPR002048 GO:0005509
Aev04g3251 145 SMART efh_1 111 139 IPR002048 GO:0005509
Aev04g3251 145 SMART efh_1 1 22 IPR002048 GO:0005509
Aev04g3251 145 SMART efh_1 30 58 IPR002048 GO:0005509
Aev04g3251 145 SMART efh_1 73 101 IPR002048 GO:0005509
Aev04g3251 145 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Aev04g3251 145 CDD EFh 73 137 IPR002048 GO:0005509
Aev04g3251 145 ProSitePatterns EF-hand calcium-binding domain. 120 132 IPR018247 -
Aev04g3251 145 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 144 - -
Aev04g3251 145 ProSitePatterns EF-hand calcium-binding domain. 3 15 IPR018247 -
Aev04g3251 145 ProSiteProfiles EF-hand calcium-binding domain profile. 26 61 IPR002048 GO:0005509
Aev04g3251 145 Gene3D - 59 139 - -
Aev04g3251 145 ProSitePatterns EF-hand calcium-binding domain. 39 51 IPR018247 -
Aev04g3251 145 PANTHER CALMODULIN-LIKE PROTEIN 3 1 144 - -
Aev04g3251 145 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Aev04g3251 145 SUPERFAMILY EF-hand 1 137 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3251 Aev-Chr4 31772787 31773224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3251 1 143 EF-hand Containing Proteins AT2G43290 71.329 5.45e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3251 K13448 - csv:101210877 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1735 10 19442834 19443052 Aev04g3251 04 31772787 31773224 PCT