Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1710 ATGAAGAACAACGACAACAACAAGCACCAGCAAAACAAAGACTCTGCTTCTGCCGTGGGAATCTTAGATTCTCGATTCAATCAGACCCTCAGGAACGTTCAAGGGTTACTCAAGGGTCGTAGCATTCCTGGCAAGATCTTTGTGAGCCAGAGGGTAGACTTGCCAGACCCAAATTTATACTCACCAACTTATGAAAGGAGCTCATCGTTCAAGGACACCGGCACGAGCGATCAAGCATCTGAATCAGTAGAGGAGGAAGATCGTGGTACAAGCAAACCAATTGATACACCTAATGAGAAGATGTTAAAAGTATCAACCTCCCATGTAGAGAACCCTTCCGAAGACGTGCGGAAATCATCCATGGGTACCAGGTCTACAGACTCTGCAAGAGTTTCGAAATTCACTAAGGTGCTTTCTGGCACAGTTATATTAGAGAAGTTGCGTGAGTTAGCTTGGAGTGGTGTTCCAGAATATATGCGTCCTACAGTATGGAGACTTCTCTTGGGATATGCACCAACTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGCCTGGAGTATCTTGACAGTGTTTCTCAGTATTATGATATTCCTGATACAGAACGCTCAGATGATGAGATCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCAGATGTTCCATTCTTCCAGCAACAGCAAGTCCAGAAGTCACTGGAGCGTATTCTTTACACATGGGCTATTCGGCATCCTGCCAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCATTTTTGGTTGTTTTCCTATCAGAGCACCTAGAAGGGGGTATAGAAAATTGGTCAATGTCTGATTTATCCTCAGATAAAATTTCTAATGTAGAGGCTGATTGCTATTGGTGCTTGTCAAAGTTACTGGATGGTATGCAAGACCATTACACATTTGCTCAACCAGGAATTCAAAGGCTTGTTTTTAAATTGAAGGAATTGGTCAGGAGGATTGATGAGCCTGTTTCAAGCCATATGGATCATCAGGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGTGAGATACCCTTCCATCTTGTCACACGCCTCTGGGACACATACCTAGCTGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCCAGTTTTCTTCTAACGTGGTCAGACAAACTCCAGAAACTTGATTTCCAGGAGTTGGTAATGTTCCTTCAACACCTCCCAACTCAGAACTGGACTCATCAGGAGCTCGAGATGGTGCTTTCACGTGCATTTATGTGGCACAGCATGTTCAACAACTCTCCTAGTCATTTAGCCTGA 1353 0.4383 MKNNDNNKHQQNKDSASAVGILDSRFNQTLRNVQGLLKGRSIPGKIFVSQRVDLPDPNLYSPTYERSSSFKDTGTSDQASESVEEEDRGTSKPIDTPNEKMLKVSTSHVENPSEDVRKSSMGTRSTDSARVSKFTKVLSGTVILEKLRELAWSGVPEYMRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLDSVSQYYDIPDTERSDDEINMLRQIAVDCPRTVPDVPFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLEGGIENWSMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSSHMDHQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1710 450 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 188 315 - -
Aev10g1710 450 MobiDBLite consensus disorder prediction 1 20 - -
Aev10g1710 450 Pfam Rab-GTPase-TBC domain 159 402 IPR000195 -
Aev10g1710 450 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 317 439 IPR035969 -
Aev10g1710 450 Gene3D - 316 450 - -
Aev10g1710 450 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 2 448 - -
Aev10g1710 450 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 143 341 IPR035969 -
Aev10g1710 450 SMART tbc_4 151 407 IPR000195 -
Aev10g1710 450 Gene3D - 136 182 - -
Aev10g1710 450 MobiDBLite consensus disorder prediction 57 124 - -
Aev10g1710 450 MobiDBLite consensus disorder prediction 61 77 - -
Aev10g1710 450 ProSiteProfiles TBC/rab GAP domain profile. 154 381 IPR000195 -
Aev10g1710 450 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1710 Aev-Chr10 19302682 19306025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1710 K20360 - gmx:100776049 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1710 10 19302682 19306025 Aev10g1710 10 19302682 19306025 ECH
Aev10g1710 10 19302682 19306025 Aev04g3278 04 31920257 31924778 PCT