Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3278 ATGAACAACTCTCACAACCACAACAATCGCCAACAACAAGATCAAGTTCAACCAAACAACAACGACTCCAGATTCAATCAGACCCTCAGAACTGTTCAAGGGTTACTCAAAGGTCGTAGCATGCCTGGGAAGATATTATTGAGCCTGAGATCAGACCTGGTAGATACTTCAAACTCGAAGGAATCATTGCAAAATTACAAAAGGAGCTTCTCGCACAATGATGCTGGCACAAGCGATCGCACATATGGAGCAGCAGAGGAGGAAGTTCAGAGTACTAGCAAACCAATTAATATTGTCAATTTGAACAAGTTAAAAATACCAACCTCCTTTAGAGAGAGACCATCTGAAGAAGTTCGCATGTCTACCTTAGGTGCCAGAGCCACTGATTCTACAAGAGTTATGAAGTTCACTAAGGTGCTTTCCGGGACAATGGTTATATTAGACAAGTTGCGTGAGCTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAGCGCCTTGAGTATCTTGATTGTATTTCTCAGTATTATGATATTCCTGATACAGACCGTTCAGAAGATGAGGTCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTCCATTCTTCCACCAACAGCAAGTTCAGAAATCATTGGAGCGTATTCTGTATGCATGGGCTATTCGTCATCCTGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCATTTTTAGTTGTCTTCCTATCAGAATACTTAGAAGGGGGTATAGATAATTGGTCAATTTCTGATTTATCCACAGAGGAAATCTCGAATGTAGAGGCTGACTGCTATTGGTGCTTGTCGAAGTTGCTTGATGGTATGCAAGATCATTACACATTTGCTCAACCAGGAATTCAGAGACTTGTTTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGAGCCTGTTTCGCAACATATTGAGGATCAGGGACTTGATTTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCGTTCCATCTCATCACGCGCCTTTGGGACACATACCTAGCTGAAGGAGATGCTTTACCAGACTTCCTAGTGTATATATTTGCCAGTTTCCTTCTATCGTGGTCAGACAAGCTCCAAAAGCTTGATTTCCAAGAATTGGTCATGTTCCTTCAACGCCTTCCGACTCAGAACTGGACGCATCAGGAGCTCGAGATGGTTCTTTCGCGCGCGTTTATGTGGCACAGCATGTTCAACAACTCTCCTAGCCATTTAGCTAGCTGA 1365 0.4308 MNNSHNHNNRQQQDQVQPNNNDSRFNQTLRTVQGLLKGRSMPGKILLSLRSDLVDTSNSKESLQNYKRSFSHNDAGTSDRTYGAAEEEVQSTSKPINIVNLNKLKIPTSFRERPSEEVRMSTLGARATDSTRVMKFTKVLSGTMVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCISQYYDIPDTDRSEDEVNMLRQIAVDCPRTVPDVPFFHQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWSISDLSTEEISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSQHIEDQGLDFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLSWSDKLQKLDFQELVMFLQRLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLAS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3278 454 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g3278 454 MobiDBLite consensus disorder prediction 57 82 - -
Aev04g3278 454 Gene3D - 134 185 - -
Aev04g3278 454 ProSiteProfiles TBC/rab GAP domain profile. 157 384 IPR000195 -
Aev04g3278 454 SMART tbc_4 154 410 IPR000195 -
Aev04g3278 454 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 134 344 IPR035969 -
Aev04g3278 454 Gene3D - 319 454 - -
Aev04g3278 454 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 320 442 IPR035969 -
Aev04g3278 454 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 194 318 - -
Aev04g3278 454 Pfam Rab-GTPase-TBC domain 161 405 IPR000195 -
Aev04g3278 454 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 3 451 - -
Aev04g3278 454 PANTHER GTPASE-ACTIVATING PROTEIN GYP1-LIKE 3 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3278 Aev-Chr4 31920257 31924778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3278 K20360 - gmx:100819281 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1710 10 19302682 19306025 Aev04g3278 04 31920257 31924778 PCT