Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1706 ATGATGGTTGCTGAGAAAGTGAGTGGTCAGAATTGTGGGTGTGCATCAGGATTATGCTGCAGCAAATATGGATATTGTGGGAATGGTAATGATTACTGTGGAGATGGGTGCCAACAGGGTCCCTGTTATAACACACCCACACCCTCAACCTCAACCAGTGATGTGAATGTGGCTGACATTGTCACACAAGATTTCTTCAATGGAATAATAAATCAGGCTGATTCTAGCTGTGCAGGGAAGAGCTTCTATACACGCGATGCATTCCTCAATGCTATCAATTCATACAATCAGTTTGGTAAGATTGGCTCTGCTGATGACTCTAAGCGTGAGATTGCTGCTGCTTTTGCCCACTTCACCCATGAAACTGGACATTTTTGCTACATTGAAGAGATTAATGGTGCATCACAGAACTACTGTGACCCAAGTTACACACAGTATCCTTGCAACCCTAACAAGAAGTACTATGGGCGTGGACCATTGCAACTAACATGGAACTACAACTACGGTGCAGCTGGACAGAGCAACAACTTCGATGGATTGAATGCTCCTGAAACTGTGGCCAATGATGCTGTCGTGTCTTTCAAGACAGCCTTGTGGTATTGGATGCAGAATGTCAGGCCCGTTGTCAACCAGGGCTTTGGGGCCACCATACGGGCCATCAATGGGCCCGTTGAGTGTGATGGTCGTGAGCCCGCTAAGGTCCAGGCCCGTGTTGATTACTACAAACAATACTGTTCCCAATTCGGTGTTGCTCCTGGTGATAATCTTACTTGCTAA 777 0.4633 MMVAEKVSGQNCGCASGLCCSKYGYCGNGNDYCGDGCQQGPCYNTPTPSTSTSDVNVADIVTQDFFNGIINQADSSCAGKSFYTRDAFLNAINSYNQFGKIGSADDSKREIAAAFAHFTHETGHFCYIEEINGASQNYCDPSYTQYPCNPNKKYYGRGPLQLTWNYNYGAAGQSNNFDGLNAPETVANDAVVSFKTALWYWMQNVRPVVNQGFGATIRAINGPVECDGREPAKVQARVDYYKQYCSQFGVAPGDNLTC* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1706 258 Pfam Chitinase class I 211 258 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev10g1706 258 Pfam Chitinase class I 60 205 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev10g1706 258 SUPERFAMILY Plant lectins/antimicrobial peptides 10 48 IPR036861 GO:0008061
Aev10g1706 258 PRINTS Chitin-binding domain signature 20 27 IPR001002 GO:0008061
Aev10g1706 258 PRINTS Chitin-binding domain signature 12 20 IPR001002 GO:0008061
Aev10g1706 258 PRINTS Chitin-binding domain signature 27 34 IPR001002 GO:0008061
Aev10g1706 258 CDD chitinase_GH19 61 258 - -
Aev10g1706 258 ProSitePatterns Chitinases family 19 signature 2. 192 202 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev10g1706 258 PANTHER CHITINASE-RELATED 3 258 - -
Aev10g1706 258 CDD ChtBD1 14 38 - -
Aev10g1706 258 SUPERFAMILY Lysozyme-like 56 258 IPR023346 -
Aev10g1706 258 PIRSF Endochitinase 1 258 IPR016283 GO:0004568|GO:0005975
Aev10g1706 258 ProSitePatterns Chitinases family 19 signature 1. 77 99 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev10g1706 258 Gene3D - 6 56 IPR036861 GO:0008061
Aev10g1706 258 Gene3D - 57 258 - -
Aev10g1706 258 SMART ChitinBD_3 11 42 IPR001002 GO:0008061
Aev10g1706 258 ProSiteProfiles Chitin-binding type-1 domain profile. 9 44 IPR001002 GO:0008061
Aev10g1706 258 Gene3D Endochitinase, domain 2 129 186 - -
Aev10g1706 258 ProSitePatterns Chitin recognition or binding domain signature. 14 33 IPR018371 GO:0008061
Aev10g1706 258 Pfam Chitin recognition protein 11 42 IPR001002 GO:0008061
Aev10g1706 258 PANTHER ENDOCHITINASE EP3-LIKE 3 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1706 Aev-Chr10 19297150 19298518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1706 1 258 Glycoside Hydrolase AT3G54420 66.794 3.24e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1706 K01183 - gmx:100776582 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1706 10 19297150 19298518 Aev10g1706 10 19297150 19298518 ECH
Aev10g1706 10 19297150 19298518 Aev04g3284 04 31949736 31950914 PCT