Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3284 ATGATTGTGATGATGGTGGTGGTGCCAGAAAATATAATTGTGAGAGCAGAGAGTGATGTGTCGGTTTCAGACATAGTGACAGAGGAATTTTTCAGTGGGATAATAGATCAAGCAGATGGAGGGTGCGCAGGGAAGAGCTTCTACTCCAGAGATTCCTTCCTCAACGCTCTCAATTCCTTCCCTCAGTTCGGCAGGCTTGACATTGTTGATGATTCCAAGCGTGAGATTGCTGCTGCTTTTGCTCATTTCACCCACGAAACTGGACATTTCTGCTACATAGAAGAGATAAATGGGGCAACAAGGGACTACTGCGACGAAACTAACACAGAATACCCATGTAACCCAAACAAAGGATACTATGGTCGAGGACCAATTCAACTATCATGGAACTTCAACTATGGTCCAGCAGGGGACAACATTGGGTTCGATGGGTTGAATGAGCCTGAGACAGTGGCCAATGACCCTGTCGTGTCCTTCAAGACCGCCTTATGGTACTGGATGCAGAACGTTCGACCTGTGCTTAGCCAAGGCTTTGGTGCAACCATCAGAGCCATCAATGGTCAACTTGAGTGCGATGGTGCTAACCCAGCCACGGTTCAGGCTCGGGTTAACTATTACAAAGATTATTGTTCTCAATTTGGTGTTGATCCTGGTGATAATCTTACTTGCTAA 672 0.4628 MIVMMVVVPENIIVRAESDVSVSDIVTEEFFSGIIDQADGGCAGKSFYSRDSFLNALNSFPQFGRLDIVDDSKREIAAAFAHFTHETGHFCYIEEINGATRDYCDETNTEYPCNPNKGYYGRGPIQLSWNFNYGPAGDNIGFDGLNEPETVANDPVVSFKTALWYWMQNVRPVLSQGFGATIRAINGQLECDGANPATVQARVNYYKDYCSQFGVDPGDNLTC* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3284 223 CDD chitinase_GH19 26 223 - -
Aev04g3284 223 Gene3D - 20 223 - -
Aev04g3284 223 ProSitePatterns Chitinases family 19 signature 1. 42 64 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev04g3284 223 ProSitePatterns Chitinases family 19 signature 2. 157 167 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev04g3284 223 PIRSF Endochitinase 6 223 IPR016283 GO:0004568|GO:0005975
Aev04g3284 223 Pfam Chitinase class I 176 223 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev04g3284 223 Pfam Chitinase class I 25 171 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev04g3284 223 Gene3D Endochitinase, domain 2 94 151 - -
Aev04g3284 223 PANTHER CHITINASE-RELATED 2 223 - -
Aev04g3284 223 PANTHER ENDOCHITINASE EP3-LIKE 2 223 - -
Aev04g3284 223 SUPERFAMILY Lysozyme-like 21 223 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3284 Aev-Chr4 31949736 31950914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3284 20 223 Glycoside Hydrolase AT3G54420 76.961 4.10e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3284 K01183 - twl:120006438 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1706 10 19297150 19298518 Aev04g3284 04 31949736 31950914 PCT