Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1644 ATGAACGGTGGCGATGAGGTCGTCGCAGCTCCGGCGGGTCCACCGCCCCCTCTGGAGTGGAAATTCTCACAGGTTTTCGGTGAACGCACGGCCGGTGAGGAGGTTCAGGAAGTGGACATAATTTCTGCAATTGAATTTGACAAATCTGGTGATCATCTTGCTACCGGTGATCGTGGCGGCCGAGTTGTTCTCTTTGAGAGAACTGATACAAAAGATCTTGGTGGATCAAGGAGGGATAGGGAGAGGATGGACTACTCTATTAGTAGGCACCCTGAGTTCCGCTATAAAACAGAGTTTCAGAGTCACGAGCCTGAGTTTGACTATCTCAAGAGCTTGGAAATAGAAGAGAAAATCAACAAAATCAGATGGTGCCAAACAGCTAATGGAGCTCTCTTCCTTCTTTCTACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAAGTCAAGAAAGTTTCTGAGATGAATGTTGACTCTTCGAAAGCAATGGGAAATGGCTCTATTGGTAGTTCAAGTAGTTCTAGGGCATACCTTGCAAATGGAGGATCTGCAGATAGATCATACAATTATCTAAGCAATGACTTCTCATTTCCACCAGGAGGGGTACCATCGCTAAAGTTACCCGTGGTAGTAAGTAGCCAAGAGACCAGCTTGGTGGCTCGATGTCGAAGAGTATATGCCCATGCTCATGATTATCATATCAATTCTATTTCAAATAACAGTGATGGCGAAACTTTCATATCAGCCGATGACTTGCGTATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTGAAGCCTGCAAATATGGAAGATCTGACAGAGGTAATAACATCAGCAGAATTCCACCCTACACATTGTAATATGTTGGCATATAGCAGTTCGAAGGGTTCAATTCGTCTTGTTGACTTGCGGCAATCAGCACTATGTGATTCTCATTCCAAATTGTTTGAGGAGCAGGAGACCCCTGGGTCCAGATCATTTTTCACCGAGATTATTGCTTCTATCTCAGACATAAAATTTGGGAAGGATGGAAGATACATACTTAGTCGTGATTACATGACTCTAAAGTTATGGGACATTAACATGGATTCGGGCCCTGTTGCAACTTTCCAGGTTCATGAGTATCTTAGACCTAAGCTTTGCGATTTATATGAAAATGATTCAATATTTGACAAGTTCGAGTGTTGTCTGAGTGGTGATGGATTGCGTGTAGCAACTGGTTCTTACAGCAATCTATTCCGTGTGTTCGGTTGTGCCCAGGGAAGTGCCGAGGCTACAACCTTGGAAGCCAGTAAAAATCCAATGAGACGACAAGTTCCAACCCCTTCGTCAAGGCAAAGATCTCTTGGGAATAGCTTAACCCGAGTTGTAAGACGAGGAGCGGAAACCGCAGGCGTCGATGCGAATGGGAATTCTTTTGATTTCACAACAAAGTTGCTGCACTTGGCGTGGCATCCAACCGAAAATTCGATCGCTTGTGCTGCTGCAAATAGCTTGTACATGTACTATGCGTAA 1542 0.4345 MNGGDEVVAAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDLGGSRRDRERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSEMNVDSSKAMGNGSIGSSSSSRAYLANGGSADRSYNYLSNDFSFPPGGVPSLKLPVVVSSQETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDSHSKLFEEQETPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCAQGSAEATTLEASKNPMRRQVPTPSSRQRSLGNSLTRVVRRGAETAGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1644 513 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 230 244 IPR018067 -
Aev10g1644 513 Gene3D - 323 508 IPR015943 GO:0005515
Aev10g1644 513 SUPERFAMILY WD40 repeat-like 39 505 IPR036322 GO:0005515
Aev10g1644 513 MobiDBLite consensus disorder prediction 441 461 - -
Aev10g1644 513 Gene3D - 217 322 IPR015943 GO:0005515
Aev10g1644 513 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 513 - -
Aev10g1644 513 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 513 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 SMART WD40_4 330 368 IPR001680 GO:0005515
Aev10g1644 513 SMART WD40_4 221 260 IPR001680 GO:0005515
Aev10g1644 513 SMART WD40_4 105 145 IPR001680 GO:0005515
Aev10g1644 513 SMART WD40_4 372 426 IPR001680 GO:0005515
Aev10g1644 513 SMART WD40_4 31 66 IPR001680 GO:0005515
Aev10g1644 513 SMART WD40_4 271 311 IPR001680 GO:0005515
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 288 316 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 373 398 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 232 259 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 317 344 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 399 425 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 345 372 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 482 511 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 260 287 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Aev10g1644 513 Pfam WD domain, G-beta repeat 224 260 IPR001680 GO:0005515
Aev10g1644 513 PIRSF PPA2_B55 12 513 IPR000009 GO:0000159|GO:0019888
Aev10g1644 513 Gene3D - 35 196 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1644 Aev-Chr10 18913607 18919259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1644 K04354 - gmx:100799449 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0546 09 4872969 4879420 Aev10g1644 10 18913607 18919259 ECH
Aev10g1644 10 18913607 18919259 Aev10g1644 10 18913607 18919259 ECH
Aev10g1644 10 18913607 18919259 Aev09g0546 09 4872969 4879420 PCT