Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1628 ATGACACTGCTCAGAACCATCTTCATCAAGCGCCACCACCACCATCGCCACCTCTTCAGCCCCAAATGCATATTCTCTTCGCTTTCTCTCTCTCTCCATTCCTTTCGCTCCCTTCAATCTTCCCGCCACTCCCACTCCTCCGCCACCGCCGACTCTCCGCAAACTCATGACGACACAAGAACCTCCCGCAGCAGCTGGAGCACATACGGCAACGTTTTTGACAGTCACATTGACACCCCTTTTAAGCAGCGCCACAGACCCACCCATATCAGTGATCACGATAATGATGATCGTGAAGAAGTAGGCGAAGAGGAACGAGAAGAAGAAGAAAAAGTTGAAGATGAAGTTGAAGAAACTCGTTATGCAATTCCAAAGCCGAGTAAGAGGAGAGAAGTGAAAACCGCGGCGAACCCAGTGGTGGGTGGCGAATTATTTCCGTCGAGCATGGTTAGGACGAAGAGAAGCAGCAGCGTGAAGGTGAAGAAGCAATGGGTATGCTCGAATTGCGGTTTTGCAGCTGGTCAATGGTGGGGGATATGCCCTTCCTGCGATGTATCCGGGGCAATGAAGGTGTTTCATGAGGCCAAGCCCACTGATTCTGACACCAAGTCCAATAGTGGGTTAGCGATTTCTGAGGATGCTGTGGGATTGTGGCTCCCACAGAATGCTGCCGAATTGCGCCCAATCAAATTGGAGGAGGTCAACCAGGGATTCAATCATCAGCACTGGAGGCTCCCTCTGTCTGGTCCTTTTGGAACTGAAGTTTCTACAGTGCTTGGCGGTGGTCTTGTTCCAGGCTCTTTGACTTTAGTTGGTGGTGATCCTGGTGTTGGAAAGAGTACTCTGTTGTTACAGATGGCAGCAAAAATAGCAAAAGATTGCAATGACGGAAAAGCATCTCCAGTATTATATGTATCTGGCGAAGAGAGCCTTGAGCAAATTGGTAACAGAGCAGAACGCCTTGGGATTAAATCGGATATTTATCTATATTCAAGTACTGATATTGAGGACATACTGAAGAAAGCTCAGATTCTTTCCCCTCGAGCCGTGGTGGTTGATTCAATACAAACTGTTTATTTGAAAGGACTATTAGGAAGTGCTGGAGGGATTTTGCAGGTAAAGGAATGTACTGCAGCTTTGATGCGATTTGCAAAAACGACTAACATCCCAGTTCTTTTGATTGGGCATGTTACAAAATCTGGGGAAATTGCTGGACCTCGGGTCTTGGAGCATATAGTGGACGTTGTTTTGTATATGGAAGGCGAGAAGTGCTCTTCCTATCGAATGCTTCGTGCTGTGAAAAATCGGTTTGGGTCCACTGATGAGCTTGGAGTTTTTGAGATGTTGCAATCAGGGCTACAGGCTGTTCGAAATGCCAGTGAAATATTTCTCAGTGAACAACACTCCGATTCGGAGATTTTAGCTGGACTAGCTATTACTGTACTAATGGATGGTTCAAGAACTTTCTTAATCGAAATTCAGGCACTTTGTGTTTCACCCTGCCCAGTTCCAATTTCAACATCTCCAGGTCAAATAGTTAATGGGATCGATTCAAAAAGAGCTAATATGATCAAATGTGTACTTGTAAAGCAAGCAGGTCTTCAGCTCCAAGATAATGCTGTGTTTTTGAACGTTATTAGTGGATGGACAATTAAGGAGACTGCTGGGGATCTTGCAATAGCCGCTGCAATTTGCAGCAGTTTCTTGGAGTTTCCTATCCCAAAAGGTTTTGCATTCATAGGTGAAATTGGTCTAGGTGGAGAGCTTCGCATGGTTCCTAGAATTGAGAAAAGAGTATACACAGTAGCAAAGTTGGGTTACAAAGTCTGTGTTGTACCAAAGCAAGCTGAAAAGGTTATAGGAACTGAAGGTCTAGGAAACATGACAGTTATAGGTTGCAAGAATCTGAAAGAGGTTATTAACTCTGTTTTCACTGCAAAATGA 1944 0.4516 MTLLRTIFIKRHHHHRHLFSPKCIFSSLSLSLHSFRSLQSSRHSHSSATADSPQTHDDTRTSRSSWSTYGNVFDSHIDTPFKQRHRPTHISDHDNDDREEVGEEEREEEEKVEDEVEETRYAIPKPSKRREVKTAANPVVGGELFPSSMVRTKRSSSVKVKKQWVCSNCGFAAGQWWGICPSCDVSGAMKVFHEAKPTDSDTKSNSGLAISEDAVGLWLPQNAAELRPIKLEEVNQGFNHQHWRLPLSGPFGTEVSTVLGGGLVPGSLTLVGGDPGVGKSTLLLQMAAKIAKDCNDGKASPVLYVSGEESLEQIGNRAERLGIKSDIYLYSSTDIEDILKKAQILSPRAVVVDSIQTVYLKGLLGSAGGILQVKECTAALMRFAKTTNIPVLLIGHVTKSGEIAGPRVLEHIVDVVLYMEGEKCSSYRMLRAVKNRFGSTDELGVFEMLQSGLQAVRNASEIFLSEQHSDSEILAGLAITVLMDGSRTFLIEIQALCVSPCPVPISTSPGQIVNGIDSKRANMIKCVLVKQAGLQLQDNAVFLNVISGWTIKETAGDLAIAAAICSSFLEFPIPKGFAFIGEIGLGGELRMVPRIEKRVYTVAKLGYKVCVVPKQAEKVIGTEGLGNMTVIGCKNLKEVINSVFTAK* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1628 647 PANTHER DNA REPAIR-LIKE PROTEINRADA 1 645 - -
Aev10g1628 647 ProSiteProfiles RecA family profile 1. 244 397 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aev10g1628 647 Coils Coil 98 118 - -
Aev10g1628 647 PRINTS DNA repair protein radA signature 353 377 - -
Aev10g1628 647 PRINTS DNA repair protein radA signature 427 453 - -
Aev10g1628 647 PRINTS DNA repair protein radA signature 166 190 - -
Aev10g1628 647 PRINTS DNA repair protein radA signature 392 420 - -
Aev10g1628 647 PRINTS DNA repair protein radA signature 257 285 - -
Aev10g1628 647 MobiDBLite consensus disorder prediction 78 118 - -
Aev10g1628 647 MobiDBLite consensus disorder prediction 78 96 - -
Aev10g1628 647 Gene3D - 254 449 IPR027417 -
Aev10g1628 647 Pfam Subunit ChlI of Mg-chelatase 529 615 - -
Aev10g1628 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 449 IPR027417 -
Aev10g1628 647 SMART AAA_5 265 423 IPR003593 -
Aev10g1628 647 MobiDBLite consensus disorder prediction 97 115 - -
Aev10g1628 647 SUPERFAMILY Ribosomal protein S5 domain 2-like 434 644 IPR020568 -
Aev10g1628 647 Gene3D - 472 647 IPR014721 -
Aev10g1628 647 PANTHER DNA REPAIR PROTEIN RADA 1 645 - -
Aev10g1628 647 TIGRFAM sms: DNA repair protein RadA 159 639 IPR004504 GO:0003684|GO:0005524|GO:0006281
Aev10g1628 647 Pfam AAA domain 257 401 - -
Aev10g1628 647 Pfam Rubredoxin metal binding domain 164 189 IPR041166 -
Aev10g1628 647 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1628 Aev-Chr10 18822765 18829056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1628 K04485 - gmx:100791181 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1628 10 18822765 18829056 Aev10g1628 10 18822765 18829056 ECH
Aev10g1628 10 18822765 18829056 Aev09g0581 09 5184939 5192063 PCT