Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0581 ATGCTTTCCCTCACATTCTCTCCTTTCCCTTTCCACCCTTCAAACCCCTCAATCCCACACCGCAACCCATTCCCACAAAATGCAACCTTTCGCTTTGACTCCCCACAAGGCAAATTCACCACCAATTCAAACCCTCCTTCTCACGGCAAGGAGCAAAACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGACCGCAAAGTTGAAGACTTTGATAGAGAAATGGCAAGTTTGAGAGTAAAGGGTACAAACCCAGTTCATGGAATTGGAATTGGTTCTGTGAGAAAGACAAAAAAGGTTAAGGATAAGGTTCATTGGGTTTGCAGCAATTGTGGGTACAGTACTGGGCAATGGTGGGGTGTGTGTAGATCATGTGGTGAAGCTGGAACAATGAAGGAGTTTCATGAGCCGAAAGCAAGTGATGGTGATGGCAACAAGGTTAGTGGTTTTGCTGTTTTGGAAGGTGCTTTGGGATCATGGCTACCTCAGCAGGATGGTGAGTTGCGTCCTTTGAGATTGGCTGAGGTGAATAGGGGACTTGATCAACAGCATTGGAGAATCCCTTTAAATGGTCCTTGTGGAAATGAAGTTGCTAGGGTGCTTGGTGGTGGCCTTGTACCAGGCTCTTTGACTTTAGTTGGTGGTGATCCTGGAGTTGGGAAGAGTACTCTGCTGTTGCAGATTGCTGCAATGATCACAGAGGAGTGCAGTGATGGTGAAGCATCTCCAGTCGTGTATGTCTCTGGCGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTGGGATTACTTCAGACATTTACTTGTATTCAAGTAATGATATTGAGGACATATTGAAGAAAATTCAGCATCTCTGCCCTCGGGCTCTAGTTATTGATTCAATACAAACTGTTTATTTGAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTGCTGCGATTTGCAAAGACGACAAACATCCCCGTTCTTTTGATTGGACATGTGACTAAATCTGGAGACATAGCAGGACCTCGGGTCTTGGAGCATATTGTAGATGTTGTTTTGTATATGGAAGGGGAGAAGTACTCTTCCCATCGCATGCTTCGAGCTGTGAAAAATCGATTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGTTGCATTCAGGACTTCAGGCCGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAGCAACACTTGGATTCGGAAATTTTAGCTGGGCTAGCTGTTGCTGTGATAATGGATGGCTCCCGAACATTCCTTATTGAAATCCAGGCACTTTGTCTTTCTGGTTCAATAGGTTCAAGGCAAGTTAATGGGATCCAAGCAAGTAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCTGGTCTTCGTCTACAAGAAAATGCTGTGTTTTTGAACGTTGTTAGCGGCTTGACGCTGAGCGAGACTGCAGGAGATCTTGCGATAGCAGCTGCGATTTGCAGCAGTTTCTTGGAGGTCCCAATTCCTAACGATATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGAATGGTTCCTAGAATGGAGAAAAGAGTACACACAGTGGCGAAATTGGGTTACAGAATGTGCATAGTACCAAAATCAGCTGAAAAAACCTTAGGAACTGAAGGTTTAGAAAAGATGACTCTTGTTGGTTGCAGGAATCTGAAGGACGTTATTAACACTGTCTTTCCCAAAATAATGAAAAGAAGATAG 1764 0.4388 MLSLTFSPFPFHPSNPSIPHRNPFPQNATFRFDSPQGKFTTNSNPPSHGKEQNPSSSSSSSSSSDRKVEDFDREMASLRVKGTNPVHGIGIGSVRKTKKVKDKVHWVCSNCGYSTGQWWGVCRSCGEAGTMKEFHEPKASDGDGNKVSGFAVLEGALGSWLPQQDGELRPLRLAEVNRGLDQQHWRIPLNGPCGNEVARVLGGGLVPGSLTLVGGDPGVGKSTLLLQIAAMITEECSDGEASPVVYVSGEESVEQIGNRADRLGITSDIYLYSSNDIEDILKKIQHLCPRALVIDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKTTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAVKNRFGSTDELGVFEMLHSGLQAVSNASEMFLSEQHLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSIGSRQVNGIQASRADMIISVLIKQAGLRLQENAVFLNVVSGLTLSETAGDLAIAAAICSSFLEVPIPNDIAFIGEIGLGGELRMVPRMEKRVHTVAKLGYRMCIVPKSAEKTLGTEGLEKMTLVGCRNLKDVINTVFPKIMKRR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0581 587 PANTHER DNA REPAIR-LIKE PROTEINRADA 61 581 - -
Aev09g0581 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 392 IPR027417 -
Aev09g0581 587 SUPERFAMILY Ribosomal protein S5 domain 2-like 376 580 IPR020568 -
Aev09g0581 587 Gene3D - 415 587 IPR014721 -
Aev09g0581 587 MobiDBLite consensus disorder prediction 1 70 - -
Aev09g0581 587 Gene3D - 196 392 IPR027417 -
Aev09g0581 587 PRINTS DNA repair protein radA signature 108 132 - -
Aev09g0581 587 PRINTS DNA repair protein radA signature 369 395 - -
Aev09g0581 587 PRINTS DNA repair protein radA signature 444 467 - -
Aev09g0581 587 PRINTS DNA repair protein radA signature 334 362 - -
Aev09g0581 587 PRINTS DNA repair protein radA signature 199 227 - -
Aev09g0581 587 PRINTS DNA repair protein radA signature 295 319 - -
Aev09g0581 587 Pfam AAA domain 201 343 - -
Aev09g0581 587 Pfam Rubredoxin metal binding domain 106 133 IPR041166 -
Aev09g0581 587 Pfam Subunit ChlI of Mg-chelatase 461 551 - -
Aev09g0581 587 ProSiteProfiles RecA family profile 1. 183 339 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aev09g0581 587 MobiDBLite consensus disorder prediction 21 64 - -
Aev09g0581 587 SMART AAA_5 207 365 IPR003593 -
Aev09g0581 587 TIGRFAM sms: DNA repair protein RadA 101 563 IPR004504 GO:0003684|GO:0005524|GO:0006281
Aev09g0581 587 PANTHER DNA REPAIR PROTEIN RADA 61 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0581 Aev-Chr9 5184939 5192063 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0581 K04485 - gmx:100794165 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0581 09 5184939 5192063 Aev09g0581 09 5184939 5192063 ECH
Aev10g1628 10 18822765 18829056 Aev09g0581 09 5184939 5192063 PCT