Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1612 ATGGTAAGAGTGGTATTGTATATGCTTAGAAAAGGCATATCAAAGGGGAAGCTGATGATGGACCTCAACATGTTCCTCAAACGCCGCGGCAAGCTCGCCGGAAAAGCCATCGCCAACCTCATGTTCCACCACTCATCATCAAACCCCACTCCACAATTCTACTCCGCCTCAAGGGAATACGAGTTCAGCTGCAGCAACACCCCCAACAACCACCACTTCTTCTTCCCCACCATCGGAAGTAATAGTAATAAGCGCACTAGTCACGCCAACTTCTTCGCCTGCGCTCACGCTCCGTCCACGCGTGAAGTCAAGGCTGTGCTTGACATGCTCAACAGCAATAATAACGAGGTGATGATGACGGCGGCGTCACCGGCGCTGCCAGGGTTCGGGCGGAGCCCTAAGGTGAGGCAGCTGAGGGTGACGGACTCGCCCTTCCCTCTCAGAGATGATGACAAGGACGACCACCAGGTTGACAAGGCTGCCGAAGACTTCATCAAGAGGTTTTACAAGGAATTGAGGAAGCAAGATTAA 531 0.5273 MVRVVLYMLRKGISKGKLMMDLNMFLKRRGKLAGKAIANLMFHHSSSNPTPQFYSASREYEFSCSNTPNNHHFFFPTIGSNSNKRTSHANFFACAHAPSTREVKAVLDMLNSNNNEVMMTAASPALPGFGRSPKVRQLRVTDSPFPLRDDDKDDHQVDKAAEDFIKRFYKELRKQD* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1612 176 Pfam Cotton fibre expressed protein 155 175 IPR008480 -
Aev10g1612 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 175 - -
Aev10g1612 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1612 Aev-Chr10 18703653 18704183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1612 - - gmx:100786928 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0276 09 2252099 2252689 Aev10g1612 10 18703653 18704183 ECH
Aev10g1612 10 18703653 18704183 Aev10g1612 10 18703653 18704183 ECH
Aev10g1612 10 18703653 18704183 Aev09g0276 09 2252099 2252689 PCT