Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0276 ATGGAAACCAACTTGCCAGTTATAGCAAAGAGAGTATGGAACGTACTACGTGTTGCCTTATACATGTTGAGAAAAGGCATTTCAAAGGGTAAGCTTATTATGGATCTCAACATGGTTCTCAAACGCCGTCGAAAACTCGCCGGAAAAGTCATTAGCAACCTCATCAACCACCACAACCACGACCACGGCCACGACGACCGCCACGAATTCTCGACAACGAGGGAATACGAGTTCAGCTGCAGCAACACGCCAAACAACCACTTCTTTTCCGTTATTGGTGGCAACAACAAGCGTAACCGTCGTAACAACTTCTTCACGCGCTCTCACCACGCGCCTTCTAACGCGCGTGAAGATGACGCGGTGACAGTTAGTGCCGTTAAGGCTGTGTTGGAGATGCTGAACAATGAGGCTGTTGTTGAGGCGTCGCCGGCCCTTCCCGGGTTCGGTCGGAGCCCTATGGTGAGGCAGCTGAGGGTGACCGACTCGCCGTTTCCGGTCGGCGACGCCGAGGAGGACAAGGATCACCAGGTGGACAAGGCGGCTGAGGAGTTCATAAAGAGGTTCTACAAGGAGTTGAGGAAGCAAGATTGA 591 0.5245 METNLPVIAKRVWNVLRVALYMLRKGISKGKLIMDLNMVLKRRRKLAGKVISNLINHHNHDHGHDDRHEFSTTREYEFSCSNTPNNHFFSVIGGNNKRNRRNNFFTRSHHAPSNAREDDAVTVSAVKAVLEMLNNEAVVEASPALPGFGRSPMVRQLRVTDSPFPVGDAEEDKDHQVDKAAEEFIKRFYKELRKQD* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0276 196 Pfam Cotton fibre expressed protein 175 195 IPR008480 -
Aev09g0276 196 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 195 - -
Aev09g0276 196 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0276 Aev-Chr9 2252099 2252689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0276 - - gmx:100802625 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0276 09 2252099 2252689 Aev10g1612 10 18703653 18704183 ECH
Aev09g0276 09 2252099 2252689 Aev09g0276 09 2252099 2252689 ECH
Aev10g1612 10 18703653 18704183 Aev09g0276 09 2252099 2252689 PCT