Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1531 ATGGACTTCCATCATCATCATCATCATCACTCTCCAACCAAAACTCCAACAACCATAGCAAACAATTGCCCCTGCACAGTGCTAGATTACTTCCTCACAGCAGCAATGAACAAGCAACAATCTTGCCCTGAAGAAGAATCCATCACTTCTAATTTCCCATCTGCAGAAAAATCTCCAACCAATTTCTCATCCTCAGAAAATTGCTGGTTCGATGATGCATGCATCCTTGACATGGACTACTTTGTGAAGACCCTCTCTGGAATCAAAGAGAAAGGTGTGCGAGCTGATCTGATCGGTTCCATCATCACTCACTATGCTTCCAAATGGCTCCCTGACCTCTCTGCAGAAAAGGGTCTCACCCCATTACATGGATCATCACCAGAGAGTGCCACAACATCATGGATGAAGAAGAGGTTCTTCGTGGAAACCTTGGTTGGTGTTCTTCCTCCAGAGAAGGACTCAATCCCATGTAACTTCCTCCTTAGGCTTCTCAGAACAGCAAACATGGTTGGAGTTGAGGCCACTTACAAGGGTGAGCTTGAGAAGAGGATTTCTTGGCAGCTTGATCAGGCTTCATTGAAGGAGCTCATGATACCCTCTTTTAGCCACACTTGTGGGACTCTGCTTGATGTTGAGCTTGTGATTAGGTTGGTTAAGAGGTTTGTGAGCTTGGACCATGAAGGGGTTAAGAGTGGTGCTGCTCTGGTTAAAGTGGCTAAGTTGGTTGATTGCTACCTTGCTGAGGCTGCTGTGGATTCTAATCTCAGTTTGTCTGAGTTTGTTGCACTTGCTGGTGCTCTTCCAAGCCATGCAAGAGCTACTGATGATGGCTTGTACAGAGCAATTGATACTTATCTAAAAGCACATCCGAGTGTGTCAAAGCAAGAAAGGAAGGGTCTATGCAGGCTTATTGATAGCAGAAAGCTCACACCAGAGGCTTCACTTCATGCAGCTCAGAATGAAAGGTTGCCTGTGAGAGCTGTCATTCAGGTTCTCTTCTCTGAACAGACCAAACTCAACCGCCACGTCGATTGGAGTGGCTCCTTCAGTGGCTTGAGGAGTCCCAAATCCAATGTCGGCTTCGATCCACCGACACGGTGCCTCTCAAAGCGCGAAATGAATGCTCAGCAGATGGAGATAAGGAAGCTCAAGGAAGATGTTTACAGGCTGCAAAGCCAGTGCAATGCCATGCAGATGCAGATGGAGAGGATGGTAGAGAAGAAGAAAGGGTTCTTCAAGTGGAAGAAGTTTGGTGTGTATGGCTTTGGTAAAAGCTTGGGAGAGGTTGAGAAGATTGTGGAAAGAGAGGGTGAAGGGGAAGTTGGGTTTGGAAGGGAAACACCAATGGACATGAAAAGCAGTTTGGTCAGTGTTAGAACTCCTCACAAGTGGAGGAAATCTACATCATGA 1410 0.4645 MDFHHHHHHHSPTKTPTTIANNCPCTVLDYFLTAAMNKQQSCPEEESITSNFPSAEKSPTNFSSSENCWFDDACILDMDYFVKTLSGIKEKGVRADLIGSIITHYASKWLPDLSAEKGLTPLHGSSPESATTSWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEATYKGELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFVSLDHEGVKSGAALVKVAKLVDCYLAEAAVDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHVDWSGSFSGLRSPKSNVGFDPPTRCLSKREMNAQQMEIRKLKEDVYRLQSQCNAMQMQMERMVEKKKGFFKWKKFGVYGFGKSLGEVEKIVEREGEGEVGFGRETPMDMKSSLVSVRTPHKWRKSTS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1531 469 ProSiteProfiles NPH3 domain profile. 67 338 IPR027356 -
Aev10g1531 469 Pfam NPH3 family 68 314 IPR027356 -
Aev10g1531 469 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 16 469 - -
Aev10g1531 469 PANTHER OS12G0117600 PROTEIN 16 469 IPR043454 -
Aev10g1531 469 Coils Coil 373 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1531 Aev-Chr10 18246566 18249443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1531 63 405 EF-hand Containing Proteins AT3G44820 32.292 4.40e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1531 - - gmx:100777820 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1531 10 18246566 18249443 Aev10g1531 10 18246566 18249443 ECH
Aev10g1531 10 18246566 18249443 Aev09g0183 09 1539336 1541733 PCT