Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0183 ATGCCTATGACAGTTACAAAAGAAACCAATTTCAAATCTTCCACATTACTTGAGCTTCTCACAGAATCAACCACCAACATGTTACCATCAAAATCACCATCACAATTCTCATCTGAATGCTGGTTTGATGATGCTTGCATACTAGACATGGATTACTTTGTCAAGACTCTTGCAGGAATAAAGGCGAAAGGAGTTCGAGCCGATTTGATCGGTTCCATAATCACACACTATGCATCAAAATGGCTACCAGACCTGTCTGCAATTGACATAGCAGAAAAAGGCCTAACAGAATTCGAGGAAAATCCTGAGAGCGTCACGATTTCATGGATGAAAAAAAGGTTCTTTGTTGAGACATTAGTTGGTGTTCTGCCTCCAGAGAAGGACTCAATCCCTTGCAACTTCCTCCTTCGCCTTCTTCGAATAGCAAACATGGTTGGTGTTGATTCTAGCTATAGAAAAGAGCTTGAGAAGAGAATTTCATGGCAGCTAGATCAAGCTTCATTGAAAGAGCTTGTTATTCCTTCATTTAGCCACACTTGTGGGACACTATTGGATTTTGAGCTTGTGATTAGGCTTGTTAAGAGGTTTGTGAGTTTGGATAGTGAAGGTGCTAAGGGTGGTGCTGCTTTGGTTAAGGTGGCCAAGTTGGTTGATTGCTACCTCGCCGAGGCCGCCGTCGATGCCAATTTGACCTTGTCTGAGTTTGTCACCCTTGCTGGAGCACTTCCAAGCCATGCTAGAGCAACAGATGATGGATTGTACAGATCCATTGATACTTATCTCAAAGCACATCCAGGGGTATCAAAGGAAGAGAGGAAGGGTCTATGTAGGCTTATTGATAGCAGAAAACTCACAGCAGAGGCATCACTTCATGCTGCACAAAATGAAAGGTTCCCAGTGAGAGCAGTGATTCAAGTTCTTCTCTCTGAGCAAACAAAATTGAACAGGCAATTAGATTGGAGTGGCTCTTTGATAAGTGGCACAAGGAGCCCCAGCAACGGCGCCACGCTCGACGCCTGCCTCTCGAAGCGCGAGATGAATGCTCAGCAGATGGAGATAAGGAAACTGAAGGATGAGGTTTATAGGCTGCAGAGTCAGTGCAATGCAATGCAGGTTCAGATGGAGAGGATGGCTTCAGAGAGGAAGAATAGAGGATTGTTCTTTAGGTGGAAGAGGTTTGGGATAATGCATAGTGCATTTAGCAGCAAAGGGGTGGGGAAAATTGATGAAGAGGTTGTTGAAAGTGAAGTTGTTGGAAGGCAAACTCCAATGGACATGAAAACTAGGTTGGTCAAAGGTAAGAATCCTCACAAGTGGAGGAAATCCATGTCATGA 1335 0.4412 MPMTVTKETNFKSSTLLELLTESTTNMLPSKSPSQFSSECWFDDACILDMDYFVKTLAGIKAKGVRADLIGSIITHYASKWLPDLSAIDIAEKGLTEFEENPESVTISWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRIANMVGVDSSYRKELEKRISWQLDQASLKELVIPSFSHTCGTLLDFELVIRLVKRFVSLDSEGAKGGAALVKVAKLVDCYLAEAAVDANLTLSEFVTLAGALPSHARATDDGLYRSIDTYLKAHPGVSKEERKGLCRLIDSRKLTAEASLHAAQNERFPVRAVIQVLLSEQTKLNRQLDWSGSLISGTRSPSNGATLDACLSKREMNAQQMEIRKLKDEVYRLQSQCNAMQVQMERMASERKNRGLFFRWKRFGIMHSAFSSKGVGKIDEEVVESEVVGRQTPMDMKTRLVKGKNPHKWRKSMS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0183 444 Coils Coil 346 373 - -
Aev09g0183 444 Pfam NPH3 family 40 289 IPR027356 -
Aev09g0183 444 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 11 444 - -
Aev09g0183 444 PANTHER OS12G0117600 PROTEIN 11 444 IPR043454 -
Aev09g0183 444 ProSiteProfiles NPH3 domain profile. 39 313 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0183 Aev-Chr9 1539336 1541733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0183 38 384 EF-hand Containing Proteins AT3G44820 31.579 1.59e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0183 - - gmx:100793820 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0183 09 1539336 1541733 Aev09g0183 09 1539336 1541733 ECH
Aev10g1531 10 18246566 18249443 Aev09g0183 09 1539336 1541733 PCT