Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1607 ATGTCTCGAATCTTATTCTCCACATGGAACAAGAACAAGAACAAGCTTCGATTCAACCCAACAATACCCAAAACTCTTTCTTCTTATTCTTCAACGAATACCCACTTCACTAATTCGCACAATCATCACCATAACCCCATCAAAACCACAACTTTCTTCTACCACAGTCTTCGCCCAATCTCAACCCACTTGACCACCCACCTCCACCACCGCCGCCGCCACTCCTTTCTCGGCGGCGCCGTCCGTCACAAGTGGGGGCGTGGCGGCTCCGATGACCTGAGTCCTCGAATCAGAAGGATTCGGGCGGACCCAAATTGTCCACGTTGCTCCAAGGACATGGCAATGGACCTTAAGCTCTTAAATCGCCACAATCTCCCAAGTGCTCCACTTCATGGTGGTGGGGAACAAGGGAACCATCATCAACATGGTGTGAACCTTTGCCCCAATTGCAATACTGCTTATTATTTTAGCCCTTATAGCAGTTCACCACTCCAAGGTTCATTTTTGGAGATTGGGGTTAATGGGGTCACTGAAAGTGGTGATGATTATGTTGATTATGTTGATGATCATTCAAGGAGAAGTAATGGTTATGGTAGTAGAGTGCCATTGTGGGAGTCTTTGAGGTCATATGGCAGTAGTGGTGGCGGTGGTGATGGGGAGCCACCGGTGGATTGGCCTAATGATGGGAATCGTGTTGCTGTGCATACTCCTCCAGGGCCACCTTTTGCCCCTGGGGTCAATGTTATTCGGGCTGCTGGGCCCCGAGAAGGTGGTGGTTCTGGCAGTGGCGGCGGCGGTGATGAGAAGACTTCATGGGGTGGTTCTAATTTGGGGAGGGATTTGCCAACTCCGAAAGAGATTTGTAAGGGTCTTGACAAGTTTGTCATTGGCCAGGACAGGGCCAAAAAGGTTTTATCTGTAGCTGTTTATAACCACTATAAAAGAATATACCATGCCTCTTTACAGAAAGGGTCAGGAGAAGATTCAGGAATTTCAGAAGGATTGGATGATGACGATCATGTGGAGCTTGAAAAAAGTAATGTCCTCTTGATGGGTCCAACAGGGTCAGGGAAGACATTACTTGCAAAAACCTTAGCTCGATTTGTGAATGTCCCATTTGTCATTGCTGATGCAACAACCTTAACACAGGCTGGATATGTTGGAGAAGATGTTGAATCAATATTGTATAAACTACTTGCGGCCGCAGAATTCAATGTTCAAGCAGCTCAACAAGGGATTGTTTACATTGATGAAGTGGACAAGATAACTAAAAAGGCGGAGAGCATAAATATTAGCCGAGATGTTTCTGGCGAGGGTGTTCAGCAGGCATTATTGAAAATGCTGGAAGGAACTATAGTCAATGTTCCTGAGAAAGGAGCAAGGAAACATCCACGGGGTGACAACATACAGATTGACACGAAGAATATTCTTTTTATATGTGGGGGTGCATTTGTTGATCTTGAAAAAACCATTTCAGAGCGACGGCATGATTCTTCCATTGGATTTGGAGCACCAGTTCGTGCCAATATGAGAGCTGGTAGAGTAACAAATGCAACTGTAGCATCATCTTTACTTGAGTCGGTGGAAAGTTCTGATCTTATTGCGTATGGTCTCATACCAGAGTTTATTGGACGATTTCCAATCTTAATTAGCTTGTCAGCTTTAACTGAAGAGCAACTTATGCTGGTCCTCACAGAACCGAAAAATGCTCTTGCTAAGCAGTACAAGAAACTATTTAGCATGAATAATGTTAAGCTACACTTCACAGAGAAAGCTCTGAGACTGATTGCGAAGAAAGCGATGGCCAAAAACACGGGTGCTAGGGGTTTAAGAGCCCTACTGGAAAGCATTCTAACCGAAGCCATGTTTGAGATTCCAGATGTTAAGACAGGAAATGAGCTGATTGACGCAGTAGTTGTTGATGAGGAATCGGTAGGATCAGTAACTGCCCCTGGCTGTGGAGGTAAAATTCTTCGCGGAGAAGGCGCTTTTGAGCGTTACCTCACCAAGATGGAGGGCGATTCAGTGGTTAATGGTGATGTAGCTGAATCGGAATTACAAGATGGGGAATCAGAGATCTCATCAAGAGCCGCAAGCATGTAA 2103 0.4546 MSRILFSTWNKNKNKLRFNPTIPKTLSSYSSTNTHFTNSHNHHHNPIKTTTFFYHSLRPISTHLTTHLHHRRRHSFLGGAVRHKWGRGGSDDLSPRIRRIRADPNCPRCSKDMAMDLKLLNRHNLPSAPLHGGGEQGNHHQHGVNLCPNCNTAYYFSPYSSSPLQGSFLEIGVNGVTESGDDYVDYVDDHSRRSNGYGSRVPLWESLRSYGSSGGGGDGEPPVDWPNDGNRVAVHTPPGPPFAPGVNVIRAAGPREGGGSGSGGGGDEKTSWGGSNLGRDLPTPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHASLQKGSGEDSGISEGLDDDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESINISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFGAPVRANMRAGRVTNATVASSLLESVESSDLIAYGLIPEFIGRFPILISLSALTEEQLMLVLTEPKNALAKQYKKLFSMNNVKLHFTEKALRLIAKKAMAKNTGARGLRALLESILTEAMFEIPDVKTGNELIDAVVVDEESVGSVTAPGCGGKILRGEGAFERYLTKMEGDSVVNGDVAESELQDGESEISSRAASM* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1607 700 MobiDBLite consensus disorder prediction 209 230 - -
Aev09g1607 700 Pfam AAA domain (Cdc48 subfamily) 344 548 IPR003959 GO:0005524|GO:0016887
Aev09g1607 700 SMART ClpB_D2_small_2 555 648 IPR019489 -
Aev09g1607 700 Pfam C-terminal, D2-small domain, of ClpB protein 555 625 IPR019489 -
Aev09g1607 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 641 IPR027417 -
Aev09g1607 700 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 65 700 - -
Aev09g1607 700 MobiDBLite consensus disorder prediction 249 281 - -
Aev09g1607 700 Gene3D - 554 654 - -
Aev09g1607 700 SMART AAA_5 344 506 IPR003593 -
Aev09g1607 700 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 65 700 - -
Aev09g1607 700 CDD AAA 345 503 - -
Aev09g1607 700 TIGRFAM clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 279 645 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Aev09g1607 700 Gene3D - 276 553 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1607 Aev-Chr9 20021195 20026893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1607 348 447 Miscellaneous Gene Families AT3G02450 36.634 4.57e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1607 K03544 - gmx:100805340 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1607 09 20021195 20026893 Aev09g1607 09 20021195 20026893 ECH
Aev05g3038 05 30955541 30960824 Aev09g1607 09 20021195 20026893 PCT