Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3038 ATGTCTCGAATCTTCTTTAGATGGAAGAAGGTGAAGGGAGTGGCGTCACTCTCGGAGACCCACTTGCCCGTTAACACGACCCGACCCGGTTCAAATCACCGGTTCAATCAGGTGTGTCCAATTTCGACCCATCTGAACCATCACCGCCACATCGGCGCCGGTAAAAATCGCCGGCGGGATGCTCTCGTCGGAGTTCAGGAGCGGTACAAGTGGGACCGGGGCGGATCAGATGACAACCCGACCCGAAAGATCAGGGCAGAGGCTAACTGCCCGCGTTGCACCAAAGACATGAACCTCGTATTCTCCAATCGCCATTTTCCATCAGCACCAACAACAACAGTTTCTTCTTCTTCTGATTCTGATTCTGGTAATGGCTCTTCTGGTTCTGGTTCTGGTTCTGGTTCCAATTTGGCATCACATGTTCCTGTAAGCAGTAACAATGGTGGAGGAGAAGGTGGTTACCAAGCAGTGAATCTGTGCCCAAGTTGCAAAACTGCTTATTACTTTAGGCCTTACAACACTTCACCATTGCAAGGTACCTTTGTGGAGATTGGTAGGGTCACTAATAACAACAGCAATAGTAAATCTCAGTCTCCTAGGAGGATCACACATGGAAAAGGTAGTGGTGGTAAGAGTGGAAATGGTGGTGAGGATCATGGTGTGAAGAGCAGTGGTAGTGGGAGTTGGCTTGAGGTCTCACTGTGGGACACTTTGAGGTCCTACAATGGTGTTGCTGGAGCTGGTGGTGGGAATAATGGGGAGCCACCTGAGACATCATGGCCTCAACCACCAGGTGTTGGTGGTAATAATGGGAATGGTTTGGCTGTGCATACTCCTCCAGGGCCACCTTTTGCACCCGGGATTAATGTGATCCGGGCGGGGCTAAGGGACGGTGGCTCCGGTGGTGCTGCCGGAGGTGGAGGCAATGGAGAGAAGACTAATTGGGGAGGGTCGAATTTGGGTAAGGATTTGCCTTCCCCTAAGGAAATCTGCAAGGGACTTGACAAGTTTGTTATTGGCCAAGAGAGAGCCAAAAAGGTGCTTTCTGTAGCTGTTTATAACCACTATAAAAGAATATATCATGCCACCTTGCAGAAAGGGTCAGTGGCAGATTCTGGAGTTTCAGAAGGATTAGATAAGGACGATAATGTAGAGCTAGAAAAGAGTAATGTTCTTTTGATGGGTCCTACAGGGTCAGGGAAGACATTACTTGCAAAAACTCTAGCCCGATTCGTGAATGTTCCATTTGTCATTGCTGATGCAACAACCTTAACACAGGCCGGTTACGTTGGAGAAGATGTTGAATCAATCCTGTATAAGCTACTAGCGGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATCATTTACATTGATGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCATAAATGTCAGCCGGGATGTTTCTGGTGAGGGTGTTCAACAAGCATTATTGAAAATACTGGAAGGAACTATAGTAAACGTTCCTGAGAAAGGAGCTAGGAAGCATCCTCGGGGCGATAACATACAGATGGACACAAAGGATATTCTTTTTATATGCGGTGGAGCGTTTATTGATCTTGAAAAAACCATTTCAGAGAGACGGCAAGACTCTTCTATTGGTTTTGGAGCTCCAGTTCGTGCCAATATGAGAGCTGGTGGAATAATAGATTCTGTAGTAACATCATCTTTACTTGAATCGGTGGAAAGTGCCGATCTTATTGCATATGGCCTCATTCCAGAGTTTATTGGACGATTCCCCATCTTAGTGAGCTTGTCAGCTTTAACTGAAGATCAACTTATGATGGTCCTCACTGAACCAAAAAATGCTCTTGGCAAGCAGTACAAGAAATTATTTAGTATGAATGATGTAAAGCTACACTTAACAGTAAAAGCTCTGAGACTAATTGCCAAGAAAGCAATGGCCAAAAATACTGGTGCTAGGGGATTAAGAGCCCTACTGGAAAGCATTTTAACTGAAGCCATGTTTGAGGTTCCTGATATTAAGACAGGAGATGACCGGGTTGATGCAGTTGTTGTGGATGAAGAGTCGGTAGGAACACTAACTGCCTCTGGATGTGGAGGAAAAATTCTTCGTGGAGACGGTGCTTTAGAGCGGCACCTAGCTAAGATGAAGGATTCAATGGATAATGCTGACACAGCTGAATCAGACTCACAAGATGGGGATTCTGAGGTTTCATCAAGAGCCATGAGCATGTAA 2229 0.4603 MSRIFFRWKKVKGVASLSETHLPVNTTRPGSNHRFNQVCPISTHLNHHRHIGAGKNRRRDALVGVQERYKWDRGGSDDNPTRKIRAEANCPRCTKDMNLVFSNRHFPSAPTTTVSSSSDSDSGNGSSGSGSGSGSNLASHVPVSSNNGGGEGGYQAVNLCPSCKTAYYFRPYNTSPLQGTFVEIGRVTNNNSNSKSQSPRRITHGKGSGGKSGNGGEDHGVKSSGSGSWLEVSLWDTLRSYNGVAGAGGGNNGEPPETSWPQPPGVGGNNGNGLAVHTPPGPPFAPGINVIRAGLRDGGSGGAAGGGGNGEKTNWGGSNLGKDLPSPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHATLQKGSVADSGVSEGLDKDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESINVSRDVSGEGVQQALLKILEGTIVNVPEKGARKHPRGDNIQMDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGIIDSVVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMMVLTEPKNALGKQYKKLFSMNDVKLHLTVKALRLIAKKAMAKNTGARGLRALLESILTEAMFEVPDIKTGDDRVDAVVVDEESVGTLTASGCGGKILRGDGALERHLAKMKDSMDNADTAESDSQDGDSEVSSRAMSM* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3038 742 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 53 742 - -
Aev05g3038 742 Gene3D - 597 696 - -
Aev05g3038 742 SMART AAA_5 387 549 IPR003593 -
Aev05g3038 742 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 53 742 - -
Aev05g3038 742 MobiDBLite consensus disorder prediction 188 203 - -
Aev05g3038 742 CDD AAA 388 492 - -
Aev05g3038 742 MobiDBLite consensus disorder prediction 104 150 - -
Aev05g3038 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 683 IPR027417 -
Aev05g3038 742 MobiDBLite consensus disorder prediction 716 742 - -
Aev05g3038 742 MobiDBLite consensus disorder prediction 188 227 - -
Aev05g3038 742 Gene3D - 318 596 IPR027417 -
Aev05g3038 742 Pfam C-terminal, D2-small domain, of ClpB protein 598 668 IPR019489 -
Aev05g3038 742 MobiDBLite consensus disorder prediction 245 321 - -
Aev05g3038 742 Pfam AAA domain (Cdc48 subfamily) 387 591 IPR003959 GO:0005524|GO:0016887
Aev05g3038 742 SMART ClpB_D2_small_2 598 691 IPR019489 -
Aev05g3038 742 TIGRFAM clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 321 688 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3038 Aev-Chr5 30955541 30960824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3038 K03544 - gmx:100805340 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3038 05 30955541 30960824 Aev09g1607 09 20021195 20026893 PCT