Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0465 ATGGAAACTTCTATTCTAATCTCAACCCCAACATCTCTCTCTCCTCCAATCACCACCACCTTCAAACCACAACAATTTCCTCTTTCTCTCTCCACCACAAAACAGTTACAAAAACTAGCCGTTTCCGGCAAGTGGCAGTTTCGCGACGAAACGACGACGTTTAGGTCAGAGCTCAACTTGTCCCGTTTCGTGAGCATCATTGAGGGCTTCGTCGCTGAGAAGAAGCTTCTAGAAGGGTTGAAGGTTCACGCCATTTTGATTAAGAGAGGTTATTATGATGCTAATTTCGATATTAAGGCGTGTTTGGGTAGCTTGTATTTAAATTGCGGGGAAATCAAGCTTGCACGCAAGGTGTTTGATGAATGTTCTGAAAGAGATTTTGTTCTGTTGGGTGATATGGTTGTTCGTTTCGTGAGCCGCGGTTTGTGGCTTGAAGCGTTGGAACGTTTTAGGTTGATGGTTGAGGAAGGAGTGAGGCTGAATTCGGTTTTGATTACGGTTGTTCTAACTGCTATTGGTGAAGTTTGTGCACTGAGATTAGGTCAGGAGGTTCATGGTTACTTGGTGAAGAAGAAATTGGGATATGGGCAAGCGAGGATTCGAATGGCATTGGTTGATATGTATTGCAAGTGTGGGGATGTTGGTTCGGCGAGGCGAGTTTTGTTTAGCTCCATGGAGAGGAATGTTAGCCATTGGAATGATCTTGTTAGGGGTGGTTATGTCTCGAGTGGGAGACTTAAGCAGGCAATTAAGTCCATGGTTAGGATGCGGCGAGAAGAATTACAGCCCAATGTTGTAACGGTTGCTTCTGTTCTTTCGGTTTTTGCGCAATCGAGGGCTTTGAAACAAGGGAAGGAGATACATGCTTATGCTTTGAAACATTGGTTTTTGCCTCATGTGTCTATAATTTCGTCGTTGATGGTGTTGTACTCTAAGTGTGGTGTGATTGAGTATTCTAGAAAGCTATTTGATGGTATGGAACGAAAGAATGTGATCTTGTGGACTGCCATGATCGATTCATATGTAGAAAATGGATGTATTTTTGAAGCACTTGGTGTCATTAGGTTGATGCAATCCACGGATCATAGGCCAGACACGGTTACCGTAGCGAGGATGTTGAGTGTTTGCAGCAAACTAAAACTAGTAAATCTTGGCAAGGAGATTCACGGGCAAGTATTGAAAAGGGATTTCGCGCCGGTGCATTATGTTTCTGCTGAACTTATTAACATGTATGGGAGCTGCAAAGTTGTTGATAAGGCGAAATTGGTGTTTGATTCAGTGCCTGTTAAAGGTTCAATGACATGGACTGCTCTTATAAGGGCCTATGGATATAAAGAATGGTATCAAGAAGCGATTGATCTCTTTGATCGCATGATATCAAATGGTTGTGCTCCTAACCTCTTTACTTTTGAAGTTGTTCTTTCTATGTGTGATAAAGCTGGATTTGTTGATGATGCTTTTAGGATCTTTAGTTTACTGTCAAGGTATAAAATTGAAGCCTCTAAGGAACACTGCTTTATAATGGTTCGACTTCTTACCCGTTACGGTAAACTAGATGAGGCTCAAAGATATTTAGAAATGGCTTATTCCTCGTAG 1596 0.4211 METSILISTPTSLSPPITTTFKPQQFPLSLSTTKQLQKLAVSGKWQFRDETTTFRSELNLSRFVSIIEGFVAEKKLLEGLKVHAILIKRGYYDANFDIKACLGSLYLNCGEIKLARKVFDECSERDFVLLGDMVVRFVSRGLWLEALERFRLMVEEGVRLNSVLITVVLTAIGEVCALRLGQEVHGYLVKKKLGYGQARIRMALVDMYCKCGDVGSARRVLFSSMERNVSHWNDLVRGGYVSSGRLKQAIKSMVRMRREELQPNVVTVASVLSVFAQSRALKQGKEIHAYALKHWFLPHVSIISSLMVLYSKCGVIEYSRKLFDGMERKNVILWTAMIDSYVENGCIFEALGVIRLMQSTDHRPDTVTVARMLSVCSKLKLVNLGKEIHGQVLKRDFAPVHYVSAELINMYGSCKVVDKAKLVFDSVPVKGSMTWTALIRAYGYKEWYQEAIDLFDRMISNGCAPNLFTFEVVLSMCDKAGFVDDAFRIFSLLSRYKIEASKEHCFIMVRLLTRYGKLDEAQRYLEMAYSS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0465 531 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Aev09g0465 531 TIGRFAM PPR: pentatricopeptide repeat domain 434 466 IPR002885 -
Aev09g0465 531 TIGRFAM PPR: pentatricopeptide repeat domain 333 366 IPR002885 -
Aev09g0465 531 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC 56 527 - -
Aev09g0465 531 Gene3D Tetratricopeptide repeat domain 30 178 IPR011990 GO:0005515
Aev09g0465 531 Gene3D Tetratricopeptide repeat domain 181 289 IPR011990 GO:0005515
Aev09g0465 531 Gene3D Tetratricopeptide repeat domain 290 385 IPR011990 GO:0005515
Aev09g0465 531 Pfam PPR repeat family 431 477 IPR002885 -
Aev09g0465 531 Pfam PPR repeat 304 331 IPR002885 -
Aev09g0465 531 Pfam PPR repeat 333 359 IPR002885 -
Aev09g0465 531 Gene3D Tetratricopeptide repeat domain 386 531 IPR011990 GO:0005515
Aev09g0465 531 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 330 364 IPR002885 -
Aev09g0465 531 PANTHER - 56 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0465 Aev-Chr9 4092340 4093935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0465 84 526 Glycoside Hydrolase AT3G49170 26.000 3.68e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0465 - - lang:109361554 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0465 09 4092340 4093935 Aev06g3847 06 38332583 38334694 PCT