Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3847 ATGGAACACTCTGTTTCAGCAACAGCATCTCTCTCCCTCCAACTCCACCACTTCCCTCCCATTCCCACCATCACCAACCGAACCACCTCCCACTTCCTCAACTTGAAACCACCCCAACCACCAACAAAAACCCACCACACAAAACTCCCCAGATTCACTACCCCCACCCCCTCCCCTTCCAGGAAGAGAAACAGCAACCACAACCACAACCGCAACAACAGAAGGCCTAAACCATTCTCCGACAAAGACTTGTTCCCATGTTCCCAGCCCCTGCACAGCAAGAACCCACGCACCATCTACAAAGACATCAAGCGATTCGCGCGCCAGGACAAGCTCAAGGAGGCACTCACCATCATGGACTACCTTGACCAGCAGGGCATCCCCGTCAACCCCACCACCTTCTCCGCCCTCATCGCCGCCTGCATCCGCACCAAGTCGCTGCAACAGGGCAGAGAAATCCACGTCCACATCCGAATCAATGGTCTCGAAAATAACGAGTTTTTGCGCACCAAACTCGTCCAAATGTACACTTCTTGCGGCGCATTGGAAGAAGCCAAACTCCTCTTTAACGAGTTGCCATGTAACAGCGTGTATCCCTGGAATGCATTGCTCAGAGGGACCGTTGTTTCGGGCAAAAGGCATTACCTTGACGTGCTTAAGGCTTATACGGAGATGAGGGCATTGGGGGTTGATTTGAATGTGTATAGTTTCTCTACCGTAATCAAGAGTTTTGCTGGTGCACCTGCGCTGTTTCAAGGGTTGAAGACTCACGGGTTGTTGATCAAGAATGGCTTGGTTGATAGCTCCATCATTAGGACTAGCTTGATTGATATGTACTTCAAGTGTGGGAAGACCAAGCTTGCGCGTCGCGTGTTTGAGGAAATTCCCCAGAGGGATGTTGTGGTTTGGGGCGCGATGGTGGCAGGTTTTGTGCATAATAGGCTGCAGAGGGAGGCGCTGGAGTATGTGAGGTGGATGGCGGAGGAAGGAGTGGAGGTGAACTCGGTTGTGGTGATGTCAGTTCTCCCTGCAATAGGGGAAGTTTCTGCGAGGCGGTTGGGCCAGGAGATTCATGGTTATGTGGTGAAGACGAAGGATTACAATAGACGAGTGCCTATTCAGTCAGCTTTGATTGATATGTACTGCAAGTGCGGGGACATGGGTTCGGCTAGGCAAGTTTTTTATGGCTCAGCGGAGAGGAATGTGGTTTGTTGGACGGCTCTGATGTCTGGTTATGCTTGGAATGGTAGGTTGGAGCAGGCGCTGAGGTCGACTATCTGGATGCAGCAAGAAGGGTTCAGGCCTGATGTGGTTACGGTTGCCACTGTTCTTCCAATCTGTACTCAGTTGAGGGCTTTGAGACAAGGGAAGCAGATTCATGCTTATGCTTTGAAACATTGGTTTCTGCCTAATGCGTCCATAACTAACTCGTTGATGGTAATGTACTCTAAGTGTGGCATTGTTGAGTATTCCAAAAGACTATTTGATTATATGGAGCGAAGGACCGTGATTTCATGGACAGCCATGATTGACTCGTATGTAGAAAATGGGTGTCTGAATGAAGCATTTGAAGTGATTAGGTCAATGCAATTGTCAAAGAATAGGCCGGACTCAGTTGCCATAGCAAGGATGCTGAGTGTCTGTGGTGAGCTAAAACTCGTAAAGCAGGGGATGGAGATTCATGCACAGATTTTGAAAAGGGATTTTGCATCAGTCCCTTTTGTTTCTGCAGAACTTATCAATACGTATGGGGCTCTGGGAGATGTTAATAAGGCGAAGTTGGTGTTTAATGCTGTTCGTGTGAAAGGTTCGATGACATGGACTGCTCTTATAAGGGCCTATGGATATAATGAATTGTATGAAGATGCAATTGGCCTCTTTGATCTGATGACATCGAAAGGTTCTTCTCCAACACACTTCACTTTTGAAGCAGTGCTGTGCATATGTGAAAGAGCTGGGTTTGTGGATGATGCTTATAGAATATTCAAGTTAATGACTAGATACAAAATTGAAGCATCTAAAGAACACTTGGATATGATGGCCCGGCTTCTTACCCGATATGGCCAGCATGAGAAAGCTCAGAGATTTATGCTGATGAGTTCTGCCGTATAG 2112 0.4792 MEHSVSATASLSLQLHHFPPIPTITNRTTSHFLNLKPPQPPTKTHHTKLPRFTTPTPSPSRKRNSNHNHNRNNRRPKPFSDKDLFPCSQPLHSKNPRTIYKDIKRFARQDKLKEALTIMDYLDQQGIPVNPTTFSALIAACIRTKSLQQGREIHVHIRINGLENNEFLRTKLVQMYTSCGALEEAKLLFNELPCNSVYPWNALLRGTVVSGKRHYLDVLKAYTEMRALGVDLNVYSFSTVIKSFAGAPALFQGLKTHGLLIKNGLVDSSIIRTSLIDMYFKCGKTKLARRVFEEIPQRDVVVWGAMVAGFVHNRLQREALEYVRWMAEEGVEVNSVVVMSVLPAIGEVSARRLGQEIHGYVVKTKDYNRRVPIQSALIDMYCKCGDMGSARQVFYGSAERNVVCWTALMSGYAWNGRLEQALRSTIWMQQEGFRPDVVTVATVLPICTQLRALRQGKQIHAYALKHWFLPNASITNSLMVMYSKCGIVEYSKRLFDYMERRTVISWTAMIDSYVENGCLNEAFEVIRSMQLSKNRPDSVAIARMLSVCGELKLVKQGMEIHAQILKRDFASVPFVSAELINTYGALGDVNKAKLVFNAVRVKGSMTWTALIRAYGYNELYEDAIGLFDLMTSKGSSPTHFTFEAVLCICERAGFVDDAYRIFKLMTRYKIEASKEHLDMMARLLTRYGQHEKAQRFMLMSSAV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3847 703 Pfam PPR repeat family 400 444 IPR002885 -
Aev06g3847 703 Gene3D Tetratricopeptide repeat domain 602 672 IPR011990 GO:0005515
Aev06g3847 703 Gene3D Tetratricopeptide repeat domain 367 425 IPR011990 GO:0005515
Aev06g3847 703 Gene3D Tetratricopeptide repeat domain 212 366 IPR011990 GO:0005515
Aev06g3847 703 Gene3D Tetratricopeptide repeat domain 97 211 IPR011990 GO:0005515
Aev06g3847 703 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC 76 700 - -
Aev06g3847 703 TIGRFAM PPR: pentatricopeptide repeat domain 504 537 IPR002885 -
Aev06g3847 703 TIGRFAM PPR: pentatricopeptide repeat domain 606 638 IPR002885 -
Aev06g3847 703 MobiDBLite consensus disorder prediction 28 93 - -
Aev06g3847 703 Pfam PPR repeat 375 395 IPR002885 -
Aev06g3847 703 Pfam PPR repeat 606 634 IPR002885 -
Aev06g3847 703 Pfam PPR repeat 504 530 IPR002885 -
Aev06g3847 703 Pfam PPR repeat 476 501 IPR002885 -
Aev06g3847 703 Pfam PPR repeat 273 299 IPR002885 -
Aev06g3847 703 Pfam PPR repeat 641 668 IPR002885 -
Aev06g3847 703 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 401 435 IPR002885 -
Aev06g3847 703 PANTHER - 76 700 - -
Aev06g3847 703 Gene3D Tetratricopeptide repeat domain 447 573 IPR011990 GO:0005515
Aev06g3847 703 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 536 IPR002885 -
Aev06g3847 703 MobiDBLite consensus disorder prediction 28 63 - -
Aev06g3847 703 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 299 333 IPR002885 -
Aev06g3847 703 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 603 637 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3847 Aev-Chr6 38332583 38334694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3847 88 697 Glycoside Hydrolase AT3G49170 26.645 2.25e-72 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3847 - - gmx:100809249 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0465 09 4092340 4093935 Aev06g3847 06 38332583 38334694 PCT