Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2504 ATGGCGGCAGTGGAGCTAGTCAGCGCTGCAACAAGCGACAAACTGACTGAGACTGATTGGGCGAAAAATATTGAAATCTGTGAATTAGTTGCTCAAGATCAAAGGCAAGCTAAAGATGCTGTTAAAGCTATCAAAAAGAGACTGGGTAGCAAACACCCCAACACCCAACTGTTTGCAGTCGTGTTGCTGGAAATGTTGATGAACAATATCGGAGAGCATATTCATGAGCAGGTTATTGATGCTGGAATAATACCTATTCTAGTGAAAATTGTGAAGAAAAAGTCAGATTTTCCTGTGAGGGAGAGGATATTCCTCCTACTAGATGCCACACAGACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAGTATTATAATGCATATTATGAATTGGTGAGTGCTGGAGTGCAATTTCCTCAAAGGGCTCAAGTGGCCCAACCAAATCCTCCTAGTTCACAACCTAGTACCACAAATAATGCAACAAACAGAGAGCGAGACTTACCTAGGCATGAAGGCGTTGCACAGCCGGCAGAGTCCCAGACTGTCCCAGAATCTAGCATTATTCAAAAGGCTAGTAATGCATTAGAAGTTCTAAGAGAAGTCCTTGATGCTGTGGATGCTCAAAATCCTCAGGGGGCAAGGGATGAATTCACCCTTGACCTTGTGGAACAATGTTCATTTCAGAAGCAGAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCGAGCAATCGAACTAAATGAGCAGCTTCAGAAAGTTCTTGCAAGACATGATGACCTCATTTCTGGCAGAGCCACAACGACTACTCCTCCTCGTTTTGACCATGAAGAAGCAGAGGAGGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGCAAGGGAAAGGCTTGTGCAATGCCTAAAGACGAAGAGACCGGAGCCGAGATTCCGCCCTTGGGTTTGCTCGGAGAGCGACTCAACCGACCACTAATACGACCACTCACTTTGGAGCCATCTCGGGAAGCGAACACACGTTCTCCACCTGTTGTAATGCCGACACCTCCACGTGCAAAATATAATGGGGAACTTCCTCACGTGGTGGCAAAACAGAATGGGGAGCTTCCTCAAGTGGCAATTCCACCACCGCCTGCAAAGCACGTTGAGAGGGAGAGATTCTTTCAGGAGAACAAGGATGGTTCTAATTTGTCCGGACACATGAGAGGCCTCTCCTTACATAGCCGAAATGGTAGCAGCTCTCTCAGTGGAAGCTATGATTATAGTGATTGA 1281 0.4637 MAAVELVSAATSDKLTETDWAKNIEICELVAQDQRQAKDAVKAIKKRLGSKHPNTQLFAVVLLEMLMNNIGEHIHEQVIDAGIIPILVKIVKKKSDFPVRERIFLLLDATQTSLGGASGKFPQYYNAYYELVSAGVQFPQRAQVAQPNPPSSQPSTTNNATNRERDLPRHEGVAQPAESQTVPESSIIQKASNALEVLREVLDAVDAQNPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDDLISGRATTTTPPRFDHEEAEEEEEPEQLVRRLRKGKACAMPKDEETGAEIPPLGLLGERLNRPLIRPLTLEPSREANTRSPPVVMPTPPRAKYNGELPHVVAKQNGELPQVAIPPPPAKHVERERFFQENKDGSNLSGHMRGLSLHSRNGSSSLSGSYDYSD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2504 426 Pfam VHS domain 6 112 IPR002014 GO:0035091|GO:0043130
Aev08g2504 426 PANTHER TOM1-LIKE PROTEIN 1 426 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aev08g2504 426 SMART VHS_2 3 135 IPR002014 GO:0035091|GO:0043130
Aev08g2504 426 Gene3D - 2 137 IPR008942 -
Aev08g2504 426 SUPERFAMILY GAT-like domain 150 269 - -
Aev08g2504 426 CDD VHS 3 131 - -
Aev08g2504 426 ProSiteProfiles VHS domain profile. 10 139 IPR002014 GO:0035091|GO:0043130
Aev08g2504 426 ProSiteProfiles GAT domain profile. 179 267 IPR004152 GO:0035091|GO:0043130
Aev08g2504 426 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 426 - -
Aev08g2504 426 MobiDBLite consensus disorder prediction 268 292 - -
Aev08g2504 426 CDD GAT_GGA_like_plant 187 265 - -
Aev08g2504 426 Gene3D - 177 275 IPR038425 -
Aev08g2504 426 Coils Coil 188 208 - -
Aev08g2504 426 MobiDBLite consensus disorder prediction 391 426 - -
Aev08g2504 426 MobiDBLite consensus disorder prediction 141 164 - -
Aev08g2504 426 Pfam GAT domain 193 268 IPR004152 GO:0035091|GO:0043130
Aev08g2504 426 MobiDBLite consensus disorder prediction 395 426 - -
Aev08g2504 426 SUPERFAMILY ENTH/VHS domain 5 140 IPR008942 -
Aev08g2504 426 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2504 Aev-Chr8 23828926 23831718 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2504 - - pvu:PHAVU_009G157500g 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2504 08 23828926 23831718 Aev08g2504 08 23828926 23831718 ECH
Aev03g2966 03 28848941 28851414 Aev08g2504 08 23828926 23831718 PCT