Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2966 ATGGCTGCTGAGCGAGTCAATGCTGCAACAAGCGAGAAACTAACTGAAACTGACTGGATGAAAAATATTGAAATCTGTGAATTAGTTGCTCATGATCAAAGGCAAGCTAAAGATGTTGTTAAGGCTCTAAAGAAGAGACTGAGTAACAAGAACCCAAATACTCAGCTTTATGCAGTCATGTTGTTAGAAATGTTGATGAACAATATTGGAGAAAAGATTCATGAGCAAGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCAGATTTGCCTGTTAGAGAGCGGATATTTCTTCTACTAGATGCCACACAAACATCCCTTGGTGATGCTTCTGGAAAGTTTCTGCAGTATTACAATGCATATTATGATTTAGTGAGTGCTGGGGTACAGTTTCCTCAAAGAACTCAAGAGCTCCAATCAAATCGTCCTAGTCCACAACCGAATAGTACTAATCATGGACCGAACCGAGAGCAGGCCTTACCTAGATCTGGAGGGGTTGCTCAGCAAGTAGAGTCCCAGACTGTTTCTGAATCTAGCATTATTCAAAAGGCTACTAATGCGTTGGAAGTTCTAAAAGAAGTCCTTGATGCTGTTGATGCCCAAAATCCTCAGGGAGCAATGGATGAATTCACCCTCGACCTTGTTGAACAGTGCTCATTTCAAAAGCAAAGGGTAATGCATCTTGTGATGACTTCTCGCGATGAGAGGATAGTTTCTCGAGCAATCGAACTAAATGAGCAGCTTCAGGAAGTTCTTGCAAGGCATGATGACCTCCTTTCTGGGAGAGCTACAACTCCTAACCACTTTGTCCATGAAGAAGCAGAGGAGGAAGAACCTGAACAGTTATTCAGAAGATTACGCAAAGGGAAGGCTTGTGTAAGGCCTGAAGATGAAGAGACTAAACCTGAGTTCCCGCATTTGGGTTTGCTTGAAGAGAGACTCAACCGTCCCCTAATTAGACCACTCTCTTTGGAGCCATCTCGAGAGGATAATACTCGAGCCGCACCTGCTGTTGATCTGCCTCCAACTGCAAAACACAACGGGGAGCTTCCTCATGTGGCGATTCCTCCACCGCCTGCGAAGCACTTTGAGAGGGAGCGATATTTTCAGGAAAATAAGAATGATGGTGCTACTTTGGCTAGCCACATCAGAGGCCTCTCCTTGCATAGTCACAATGGAAGCAGTTCTCACAGTGGAAGCTTTGATTTTAGTGACTGA 1236 0.4353 MAAERVNAATSEKLTETDWMKNIEICELVAHDQRQAKDVVKALKKRLSNKNPNTQLYAVMLLEMLMNNIGEKIHEQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGDASGKFLQYYNAYYDLVSAGVQFPQRTQELQSNRPSPQPNSTNHGPNREQALPRSGGVAQQVESQTVSESSIIQKATNALEVLKEVLDAVDAQNPQGAMDEFTLDLVEQCSFQKQRVMHLVMTSRDERIVSRAIELNEQLQEVLARHDDLLSGRATTPNHFVHEEAEEEEPEQLFRRLRKGKACVRPEDEETKPEFPHLGLLEERLNRPLIRPLSLEPSREDNTRAAPAVDLPPTAKHNGELPHVAIPPPPAKHFERERYFQENKNDGATLASHIRGLSLHSHNGSSSHSGSFDFSD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2966 411 PANTHER TOM1-LIKE PROTEIN 1 411 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aev03g2966 411 MobiDBLite consensus disorder prediction 330 366 - -
Aev03g2966 411 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Aev03g2966 411 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Aev03g2966 411 MobiDBLite consensus disorder prediction 140 171 - -
Aev03g2966 411 Pfam VHS domain 5 113 IPR002014 GO:0035091|GO:0043130
Aev03g2966 411 Gene3D - 175 273 IPR038425 -
Aev03g2966 411 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Aev03g2966 411 Coils Coil 187 207 - -
Aev03g2966 411 SUPERFAMILY GAT-like domain 142 268 - -
Aev03g2966 411 CDD VHS 2 130 - -
Aev03g2966 411 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Aev03g2966 411 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Aev03g2966 411 Gene3D - 2 136 IPR008942 -
Aev03g2966 411 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 411 - -
Aev03g2966 411 CDD GAT_GGA_like_plant 186 264 - -
Aev03g2966 411 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2966 Aev-Chr3 28848941 28851414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2966 - - gmx:100802949 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2966 03 28848941 28851414 Aev03g2966 03 28848941 28851414 ECH
Aev03g2966 03 28848941 28851414 Aev08g2504 08 23828926 23831718 PCT