Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2499 ATGGCTGAGGAAGCACCAAAGATGACACCAACAACAACAACACAAGAAGAGGCTGTCTTGCATGTTGAGCAAGTTGTGCTCACTGATGTTGCTCCTTCTGACAAAACAGAAGACACCACCACAACCGCCGCCGCTGTTCCTGAACCTGAGAAGAAGGCCACCGTTGAAACCGGTGGTGGGGATGAGAAGGTACCTGAATCAGGTTCGTTCAAGGAAGAGAGCACAAGGGTCTCTGATCTTGCTGACAGTGAAAAGAAGGCGCTTCAAGAGCTTAAAACTCTTATTCAGAACGCACTCAACAACCATGAATTCTCTTCTCCTCCCCCCAAAGAGGAGGAAAAGGCAGAGCCTGTTGTAGCTGCTGCTGAAGAGAAGAACAAGGAGGAACAGAACCCCGTTGAGGAAAAACAGAGTTCAGAACCAGTTAAGGAAGCTGAACAAGAACAAGAACCCACAAAACAGAGTGAAGAAGCAGAGGAGAAAAAAGAAAAAGTGAAAGAAACAGAGGTGGTTGCTGAAGAGAAAGTAGTAGCAACAGCTTCTTCTGTTGATGATGATGGAGCAAAAACCGTTGAGGCTATTGAAGAGACCGTTGTTGCTGTCACTTCTTCCTCAACTGTTCCACCGCCTGAACCTGAAGCTGCTTCTAAGGAGGAACCGAAAGAAGCCAAGGAAGAAGAGGAAAAGGAACAACAACAAGAAGAAGTAGAAGAACAAAAATCTTCACCCCCAGAAGAGGTTTCAATCTGGGGTGTGCCACTCCTTCAAGATGACAGAACCGATGTGATCCTCTTGAAGTTCCTCCGTGCAAGGGACTTTAAGGTGAAGGAAGCATTCACAATGATAAAGAACACAATAAGGTGGAGGAAGGAGTTCAAGATAGAGGAACTGATGGATGAGGATTTGGGTGATGATCTTGAGAAAGCAGTGTACATGCATGGATATGATAAGGAAGGGCACCCTGTGTGTTACAACATATATGGTGAGTTCCAGAACAAGGAGCTTTACAAGAAGACATTCTCTGATGAGGAGAAGAGGCAGAGGTTCCTGAGGTGGAGGATTCAGTTCCTTGAGAGGAGCATAAGGAAGCTTGATTTTAGCCCTGGTGGAATCTCAACCATTGTTCAGGTCAATGATCTCAAGAATTCTCCTGGACCTGCCAAAAGGGAACTTAGACAAGCTACCAATCAGGCACTTCAGCTGCTTCAGGATAATTACCCTGAATTTGTGGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTATTTGGCAGTGAACAGGATGATAAGTCCTTTCCTTACACAAAGAACCAAAAGCAAGTTTGTCTTTGCTGGTCCATCCAAATCAGCTGAGACCCTTTTGAGGTACATTGCTCCGGAGCAACTCCCTGTTAAGTATGGTGGGCTAAGCAAAGATGGGGAATTCGGAAATACTGATGCTGTTACTGAGATTACAGTGAGGCCAGCTGCTAAACACACCGTGGAGTTCCCTGTTACTGAGAATTGTCTACTGTCATGGGAGCTGAGAGTAATAGGGTGGGATGTAAGCTATAGTGCAGAGTTTGTGCCAAGCTCAGAAGGAAGCTACACAGTAATAATCCAAAAGGCAAGAAAAGTTGCTTCATCAGAAGAACCTGTGCTTTGTAACAGTTACAAAATTGGTGAGCCTGGGAAAGTGGTTATCAACATTGAAAATCCAAGCTCCAAGAAGAAGAAGCTATTGTACCGCTTGAAGACCACTACTTCAGACTGA 1752 0.4521 MAEEAPKMTPTTTTQEEAVLHVEQVVLTDVAPSDKTEDTTTTAAAVPEPEKKATVETGGGDEKVPESGSFKEESTRVSDLADSEKKALQELKTLIQNALNNHEFSSPPPKEEEKAEPVVAAAEEKNKEEQNPVEEKQSSEPVKEAEQEQEPTKQSEEAEEKKEKVKETEVVAEEKVVATASSVDDDGAKTVEAIEETVVAVTSSSTVPPPEPEAASKEEPKEAKEEEEKEQQQEEVEEQKSSPPEEVSIWGVPLLQDDRTDVILLKFLRARDFKVKEAFTMIKNTIRWRKEFKIEELMDEDLGDDLEKAVYMHGYDKEGHPVCYNIYGEFQNKELYKKTFSDEEKRQRFLRWRIQFLERSIRKLDFSPGGISTIVQVNDLKNSPGPAKRELRQATNQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAPEQLPVKYGGLSKDGEFGNTDAVTEITVRPAAKHTVEFPVTENCLLSWELRVIGWDVSYSAEFVPSSEGSYTVIIQKARKVASSEEPVLCNSYKIGEPGKVVINIENPSSKKKKLLYRLKTTTSD* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2499 583 Coils Coil 81 101 - -
Aev08g2499 583 SMART CRAL_TRIO_N_2 260 285 IPR011074 -
Aev08g2499 583 PRINTS Cellular retinaldehyde-binding protein signature 426 445 - -
Aev08g2499 583 PRINTS Cellular retinaldehyde-binding protein signature 263 285 - -
Aev08g2499 583 SUPERFAMILY CRAL/TRIO N-terminal domain 259 301 IPR036273 -
Aev08g2499 583 SMART sec14_4 304 471 IPR001251 -
Aev08g2499 583 CDD SEC14 305 469 IPR001251 -
Aev08g2499 583 MobiDBLite consensus disorder prediction 106 173 - -
Aev08g2499 583 Coils Coil 155 175 - -
Aev08g2499 583 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 299 474 IPR001251 -
Aev08g2499 583 MobiDBLite consensus disorder prediction 54 89 - -
Aev08g2499 583 MobiDBLite consensus disorder prediction 214 242 - -
Aev08g2499 583 Pfam CRAL/TRIO, N-terminal domain 243 284 IPR011074 -
Aev08g2499 583 Gene3D - 300 483 IPR036865 -
Aev08g2499 583 PANTHER PATELLIN-1 2 582 IPR044834 GO:0008289
Aev08g2499 583 Pfam CRAL/TRIO domain 308 468 IPR001251 -
Aev08g2499 583 Coils Coil 221 242 - -
Aev08g2499 583 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 480 580 IPR036598 -
Aev08g2499 583 SUPERFAMILY CRAL/TRIO domain 310 471 IPR036865 -
Aev08g2499 583 MobiDBLite consensus disorder prediction 30 246 - -
Aev08g2499 583 Gene3D - 220 291 - -
Aev08g2499 583 ProSiteProfiles GOLD domain profile. 478 579 IPR009038 -
Aev08g2499 583 Gene3D GOLD domain 484 579 - -
Aev08g2499 583 PANTHER PATELLIN-3 PROTEIN 2 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2499 Aev-Chr8 23804290 23807515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2499 264 463 Acyl Lipid Metabolism Gene Families AT5G47730 27.962 1.29e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2499 - - gmx:100805585 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2499 08 23804290 23807515 Aev08g2499 08 23804290 23807515 ECH
Aev03g2969 03 28866348 28869456 Aev08g2499 08 23804290 23807515 PCT