Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2969 ATGGCTGAGGAGGCTCCAAAGGCTCAAGAGGCGGTGGTGCAAGTGGAGGAAGTGGTGGTGGTAACTGATGTTCCACTTCCTGACAAAACTGCTACTGTTCCTGCTGACAAAGATCCACAACCTGAGCCAGTAAAGGATGAGGCTGAGGAGGAGGAGGAGAAGAAGAAGAAGAGCAAGCCTGTTGAGGAGACCGTCACTCTTGGCTCTCACTTCTCCAAATCCAACAACGACGACAAGAAGGTCCCTGAATCCGGCACCTTCAAGGAAGAAAGCACCAAGCTCTCCGATCTTCCTGAGAATGAGAACAAGGCACTCCAAGACCTGAAGCACCTCATTCAGGAAGCACTCAACAAGCACGAGTTCTCTGCCCCTGCCAACCCACCAAAAGAAGAAAAGACTGAAACCGTAGCTGAAGAGAAAGAGAAAGAGGATGAAAAGAAAGAAACCGCTGAGGAGGAAAAAGTGACTGAACCAGCTGTTACTGATGATGCAGCAACTTCAGAACCCGCGAAAACAGAGGAGGTAGTAAAAACAGAGGAACAAGTAGGAGGAGGAGAAGAAGAGAAGAGAGAAGAAGTGAAAGAAGAAACCACGGTGGTTGAAGTTGAAGAAAAAGTGGCTGCTCCTTCTGTAGATGACGACGGAGCTAAAACCGTTGAGGCCATTGAAGAGACCGTCGTTGCTGTCTCTTCTTCCTCTGTTCCAGCAACAGAGAATCCACCTACAGAGAGAGTCTCTGCAGAAGCAGAGGAGGCCAAGGAAAAACCCAAGGACGAAGCTTCACCACCATTGGCACCCGAAGAAGTATCCATTTGGGGTATCCCACTCCTCGCAGACGAGAGGAGCGACGTGATCCTCTTAAAGTTCCTCCGCGCCAGAGACTTCAAGGTGAAAGAAGCATTTGCCATGATCAAGAGCACAATCCGATGGAGGAAGGAGTTCGGAATCGAGGAGTTGTTGGAGAAGAAATTTGATGAGGAGTTGGAAAAGGTTGTGTACATGTCTGGATTCGACAAGGAAGGTCACCCTGTGTGCTACAACATATATGGTGAATTCCAGAACAAGGAGCTCTACAAGAAGGCGTTTTCTGATGAGGAGAAGAGACAGAGGTTTCTGAAATGGAGGATTCTCTTCCTTGAGAAGAGTATCAGGAACTTGGACTTCAATCCTGGTGGCATTTCCACCATTGTTCAGGTCAATGATCTCAAGAATTCTCCTGGACCTGCAAAGTGGGAGCTTAGACAAGCCACAAAACAGGCCCTGCAGTTGCTTCAGGACAATTACCCTGAATTTGTAGCCAAACAGATATTCATCAATGTGCCATGGTGGTACCTTGCTGTGAATAGGATGATAAGCCCTTTCCTTACTCAGAGAACCAAAAGCAAGTTTGTCTTTGCTGGGCCTTCAAAATCAGCAGAGACCCTCTTGAGATACATTGCTCCAGAGCAACTTCCGGTCAAGTATGGGGGGCTGAGCAAAGATGGTGAGTTCGGAAATTCCGATGCTGTTACGGAAATCACAGTGAAGCCAGCAACAAAACACACCGTGGAATTCCCTGTCACTGAGAAATGCTTAGTTTCATGGGAGCTAAGAGTTATAGGGTGGGAAGTAAGCTATCATGCAGAATTTGTGCCAAGTGAAGAAGAATCTTATACAGTACTTGTCCAGAAGACTAGAAAAGTTGGTATATCAGAAGAACCAGTTCTAAGCAACAGTTACAGAGTTGGTGAACCTGGCAAACTTGTTCTCATCATTGACAATCCAAGCTCCAAGAAGAAGAAGCTCTTGTACCGATTGAAGACCAAGCCTACACCCTCTGAATGA 1824 0.4704 MAEEAPKAQEAVVQVEEVVVVTDVPLPDKTATVPADKDPQPEPVKDEAEEEEEKKKKSKPVEETVTLGSHFSKSNNDDKKVPESGTFKEESTKLSDLPENENKALQDLKHLIQEALNKHEFSAPANPPKEEKTETVAEEKEKEDEKKETAEEEKVTEPAVTDDAATSEPAKTEEVVKTEEQVGGGEEEKREEVKEETTVVEVEEKVAAPSVDDDGAKTVEAIEETVVAVSSSSVPATENPPTERVSAEAEEAKEKPKDEASPPLAPEEVSIWGIPLLADERSDVILLKFLRARDFKVKEAFAMIKSTIRWRKEFGIEELLEKKFDEELEKVVYMSGFDKEGHPVCYNIYGEFQNKELYKKAFSDEEKRQRFLKWRILFLEKSIRNLDFNPGGISTIVQVNDLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQIFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAPEQLPVKYGGLSKDGEFGNSDAVTEITVKPATKHTVEFPVTEKCLVSWELRVIGWEVSYHAEFVPSEEESYTVLVQKTRKVGISEEPVLSNSYRVGEPGKLVLIIDNPSSKKKKLLYRLKTKPTPSE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2969 607 ProSiteProfiles GOLD domain profile. 500 601 IPR009038 -
Aev03g2969 607 MobiDBLite consensus disorder prediction 23 103 - -
Aev03g2969 607 SUPERFAMILY CRAL/TRIO domain 331 493 IPR036865 -
Aev03g2969 607 SMART sec14_4 326 493 IPR001251 -
Aev03g2969 607 MobiDBLite consensus disorder prediction 39 63 - -
Aev03g2969 607 SUPERFAMILY CRAL/TRIO N-terminal domain 93 321 IPR036273 -
Aev03g2969 607 MobiDBLite consensus disorder prediction 73 103 - -
Aev03g2969 607 CDD SEC14 326 491 IPR001251 -
Aev03g2969 607 MobiDBLite consensus disorder prediction 124 159 - -
Aev03g2969 607 SMART CRAL_TRIO_N_2 282 307 IPR011074 -
Aev03g2969 607 Pfam CRAL/TRIO, N-terminal domain 259 305 IPR011074 -
Aev03g2969 607 Gene3D - 315 505 IPR036865 -
Aev03g2969 607 MobiDBLite consensus disorder prediction 244 262 - -
Aev03g2969 607 Gene3D GOLD domain 506 601 - -
Aev03g2969 607 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 321 496 IPR001251 -
Aev03g2969 607 PANTHER PATELLIN-1 1 606 IPR044834 GO:0008289
Aev03g2969 607 MobiDBLite consensus disorder prediction 117 203 - -
Aev03g2969 607 Coils Coil 129 153 - -
Aev03g2969 607 MobiDBLite consensus disorder prediction 167 203 - -
Aev03g2969 607 Gene3D - 243 313 - -
Aev03g2969 607 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 501 600 IPR036598 -
Aev03g2969 607 PRINTS Cellular retinaldehyde-binding protein signature 285 307 - -
Aev03g2969 607 PRINTS Cellular retinaldehyde-binding protein signature 448 467 - -
Aev03g2969 607 Pfam CRAL/TRIO domain 330 490 IPR001251 -
Aev03g2969 607 PANTHER PATELLIN-3 PROTEIN 1 606 - -
Aev03g2969 607 MobiDBLite consensus disorder prediction 229 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2969 Aev-Chr3 28866348 28869456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2969 286 485 Acyl Lipid Metabolism Gene Families AT5G47730 27.488 1.01e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2969 - - gmx:100788197 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2969 03 28866348 28869456 Aev03g2969 03 28866348 28869456 ECH
Aev03g2969 03 28866348 28869456 Aev08g2499 08 23804290 23807515 PCT