Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2291 ATGGGAAAGGGCAATGCAAGCAAAGAGTATGGTGGTGGTAGTAGCAGTGGTGCTTCACTACCATCATCATCATGCGGTGATGCAAAGAAACGCAAGGTGACATATTTCTATGAACCCACCATTGGAGACTACTACTATGGCCAGGGTCACCCAATGAAGCCCCAGAGGATCCGCATGGCCCACAGCCTCATCGTCCACTACGGCCTCCACCGCCGCATGGAGGTGGCGCGCCCCAACGCCGCCACCGCCGACGACGTCCGGAAGTTTCACACCGACGACTACGTCGACTTCCTATCGACCATCTCCCCCGGCCTCTCCTCTTCCACCGGCCACTCCACTTACCGCAACTACAAGCGGTACAGCGTCGGTGACGACTGCCCCATCTTCGAGGGACTCTTCGACTTCTGCTGTGCCTCCGCCGGTGGTTCCATCGGCTCCGCCGTCAAGCTCAACCTCGGTGACGCTGACATTGCTATTAATTGGGCTGGTGGGCTCCACCATGCCAAAAAGGCTGAGGCTTCGGGTTCTGTATGTAAACAAGATATGTTGTTTGTGACTGGCCAGCGTGTGCTGTATGTTGACATTGATATTCACCACGGCGATGGCGTGGAGGAGGCGTTTTACACTACTGATAGAGTGATGACAGTGTCTTTCCATAAGTTTGGGGATTTTTCCCTGGCACTGGGCATATCAGAGACACTGGGGTTGGCAATGGAAAGAATTATTTCATGGACGTTTATCAACCCGATGCGGTTGTCCTGCAATGTGGAGCTGATTCGCTCTCTGGCGACAAGCTTGGTTGCTTCAACTTGGACTGTCAAGGGTCACGCAGATTGTCTTCGATTCCTCAGATCTTTCAATGTTCCTCTAATGGTCTTGGGCGGAGGAGGATACACAATTCGGAATGTTGCTCGTTGTTGGTGTTATGAGACTGCAGTGGCAGTAGGAGTTGAGCCTGATAACAAGTTGCCTTACAATGAATACTATGAGTATTTTGGCCCAAACTATACTCTTCATTATGAACCAAAAGAGATGAGTAACCTGAACACTGCCAAGGATATAGAAAGAATTAGGAACATGCTGCTACAACGGCTTTCTCACCTTCCCCATGCTCCCAGTGTTCCTTTTAAGACAACACCAGCAACATTGAAAGTTCCTGAAAAGGAAGAAGAGGATATGGAAACAAGACCAGCAAGTAACCTATGGAATGGGGAGGATTACGACTCGGATCAGGAGAAAAATCCGAAGGCTCGTTCGAAATCTTCAAAGTCAGCTGCCCAAAAGAGGCGCGGTCGCGATCCCATGGAAGAAGACTAG 1317 0.5065 MGKGNASKEYGGGSSSGASLPSSSCGDAKKRKVTYFYEPTIGDYYYGQGHPMKPQRIRMAHSLIVHYGLHRRMEVARPNAATADDVRKFHTDDYVDFLSTISPGLSSSTGHSTYRNYKRYSVGDDCPIFEGLFDFCCASAGGSIGSAVKLNLGDADIAINWAGGLHHAKKAEASGSVCKQDMLFVTGQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDFSLALGISETLGLAMERIISWTFINPMRLSCNVELIRSLATSLVASTWTVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPNYTLHYEPKEMSNLNTAKDIERIRNMLLQRLSHLPHAPSVPFKTTPATLKVPEKEEEDMETRPASNLWNGEDYDSDQEKNPKARSKSSKSAAQKRRGRDPMEED* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2291 438 Gene3D Histone deacetylase domain 264 380 IPR037138 -
Aev08g2291 438 MobiDBLite consensus disorder prediction 9 23 - -
Aev08g2291 438 PANTHER HISTONE DEACETYLASE 269 418 - -
Aev08g2291 438 Gene3D Histone deacetylase domain 29 236 IPR037138 -
Aev08g2291 438 PANTHER HISTONE DEACETYLASE 269 418 - -
Aev08g2291 438 PIRSF HDAC_I_euk 259 438 IPR003084 GO:0004407|GO:0016575
Aev08g2291 438 PIRSF HDAC_I_euk 16 245 IPR003084 GO:0004407|GO:0016575
Aev08g2291 438 PANTHER HISTONE DEACETYLASE 14 235 - -
Aev08g2291 438 MobiDBLite consensus disorder prediction 371 438 - -
Aev08g2291 438 PRINTS Histone deacetylase signature 85 103 IPR003084 GO:0004407|GO:0016575
Aev08g2291 438 PRINTS Histone deacetylase signature 141 161 IPR003084 GO:0004407|GO:0016575
Aev08g2291 438 PRINTS Histone deacetylase signature 52 69 IPR003084 GO:0004407|GO:0016575
Aev08g2291 438 PRINTS Histone deacetylase signature 120 137 IPR003084 GO:0004407|GO:0016575
Aev08g2291 438 MobiDBLite consensus disorder prediction 1 26 - -
Aev08g2291 438 PANTHER HISTONE DEACETYLASE 14 235 - -
Aev08g2291 438 Pfam Histone deacetylase domain 50 222 IPR023801 -
Aev08g2291 438 SUPERFAMILY Arginase/deacetylase 31 368 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2291 Aev-Chr8 22149625 22152555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2291 K06067 - gmx:100801159 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1981 01 24550580 24554275 Aev08g2291 08 22149625 22152555 PCT