Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2215 ATGATCTACAGAGAAATCAGATCATGGAACACAACCCCTCTTCATCATCATCACCCACATTCACATTCAGATTCTGTTATTGCCGGAAAAGGTGCTGTTAAGTCTCTAGTACTCCAATCCGACAAGCTTTTCAGTGCCCACCAAGACCACAAAATCCGTGTCTGGAAAATCAGCAACAACCACCACCATCATCATCATCATCACCATCACCATCAGTACACGCGTGTCGCCACGCTCCCAACGATCGGCGACCGCGCCTCAAAAGTACTAATTCCCAAGAACCATGTACAAATCAGAAGACACAAAAAGTGCACATGGGTTCACCATGTTGACACAGTCTCTGCATTAGCTCTGTCCAAAGATGGAACCTTGCTATACTCTGTTTCATGGGACAGAACAATCAAAATCTGGAGAATTAAGGACTTCTCATGCTTGGAATCACTCACAAATGCTCATGATGATGCAATAAATGCTATTGCAGTTTCTCATGAAGGACTAATCTACAGTGGTTCAGCAGATAAGAAGATCAAGGTGTGGAAGAATCAGGGGAAGAAACACAAACACAAACACACCCTTTTGGCCACATTGGAGAAACACAATTCTGGGGTCAATGCTTTGGCTCTGAGTACTGATCATGAGTCTATTTTGTATTCTGGGGCTTGTGATAGATCGATACTGGTTTGGGAGAAGAATCATGAAGATGATGAAGGGAAAATGGTAGTAGTGGGAGCTTTAAGAGGGCACACTAAGTCTATTTTGTGTTTGGTTGTGGTGTCTGATTTGGTTTTTAGTGGTTCTGCTGATAAAACAATTAGGATTTGGAAGGGTAATTTGGGTAGAGAATATTCATGTTTGGCTGTTTTGGAAGGGCATAATGGTCCAATTAAATGCATAGCTGCTGTGGGTGATGATAGTTCATCAGAGTCTGAAGCATGTTTTCTAGTCTATAGTGGAAGCTTGGATTGTGACATTAAGGTCTGGCAGATTTTTGTTCATCATCTCTGA 1005 0.4219 MIYREIRSWNTTPLHHHHPHSHSDSVIAGKGAVKSLVLQSDKLFSAHQDHKIRVWKISNNHHHHHHHHHHHQYTRVATLPTIGDRASKVLIPKNHVQIRRHKKCTWVHHVDTVSALALSKDGTLLYSVSWDRTIKIWRIKDFSCLESLTNAHDDAINAIAVSHEGLIYSGSADKKIKVWKNQGKKHKHKHTLLATLEKHNSGVNALALSTDHESILYSGACDRSILVWEKNHEDDEGKMVVVGALRGHTKSILCLVVVSDLVFSGSADKTIRIWKGNLGREYSCLAVLEGHNGPIKCIAAVGDDSSSESEACFLVYSGSLDCDIKVWQIFVHHL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2215 334 Gene3D - 155 237 IPR015943 GO:0005515
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 275 - -
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 229 IPR001680 GO:0005515
Aev08g2215 334 CDD WD40 39 328 - -
Aev08g2215 334 Gene3D - 4 154 IPR015943 GO:0005515
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 149 180 - -
Aev08g2215 334 Pfam WD domain, G-beta repeat 192 228 IPR001680 GO:0005515
Aev08g2215 334 Pfam WD domain, G-beta repeat 107 137 IPR001680 GO:0005515
Aev08g2215 334 Pfam WD domain, G-beta repeat 283 327 IPR001680 GO:0005515
Aev08g2215 334 Pfam WD domain, G-beta repeat 243 275 IPR001680 GO:0005515
Aev08g2215 334 Pfam WD domain, G-beta repeat 143 180 IPR001680 GO:0005515
Aev08g2215 334 SUPERFAMILY WD40 repeat-like 28 329 IPR036322 GO:0005515
Aev08g2215 334 Gene3D - 238 332 IPR015943 GO:0005515
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 275 IPR001680 GO:0005515
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 196 229 - -
Aev08g2215 334 SMART WD40_4 10 56 IPR001680 GO:0005515
Aev08g2215 334 SMART WD40_4 99 138 IPR001680 GO:0005515
Aev08g2215 334 SMART WD40_4 238 275 IPR001680 GO:0005515
Aev08g2215 334 SMART WD40_4 281 328 IPR001680 GO:0005515
Aev08g2215 334 SMART WD40_4 141 180 IPR001680 GO:0005515
Aev08g2215 334 SMART WD40_4 189 229 IPR001680 GO:0005515
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 180 IPR001680 GO:0005515
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 106 140 - -
Aev08g2215 334 PANTHER SIMILARITY TO GTP-BINDING REGULATORY PROTEIN AND WD-REPEAT PROTEIN 4 332 - -
Aev08g2215 334 ProSiteProfiles Trp-Asp (WD) repeats profile. 106 147 IPR001680 GO:0005515
Aev08g2215 334 PRINTS G protein beta WD-40 repeat signature 262 276 IPR020472 -
Aev08g2215 334 PRINTS G protein beta WD-40 repeat signature 315 329 IPR020472 -
Aev08g2215 334 PRINTS G protein beta WD-40 repeat signature 125 139 IPR020472 -
Aev08g2215 334 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 4 332 IPR045182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2215 Aev-Chr8 21340058 21343372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2215 151 328 Acyl Lipid Metabolism Gene Families AT3G18860 28.261 3.64e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2215 - - gmx:100777242 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2052 01 25132189 25133385 Aev08g2215 08 21340058 21343372 PCT