Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0257 ATGAACAAAATGGGTTCTCTGAAGGGACCGGTTATTCTCCCCCCAGTCCGTGCCAAAGTAGCAGGGTTGTGCAGTGTCCCTATGATTGGACCGATGAAGATCAGTAGGTGTATTAGAAGTGAATTTTGGGGACTCAGTGGTAGCAGAGCTAAGCCGAGTGCTCTTTCTTGCCATGTAAACTTGAGAAAGTGCAAGAGGGTGCATTGCAGTTTCAACTCTCCCTCAAATGATAGTGGAAGTATGGCTGAGAATTTCAATGAAAAAGATGAAGACTATGTTAACTCTAGTGTGGTTGAAGCTGTTGAGGTGAGGAGTGGAGCAGATGGTTTTGTGATCAAAATGAGGGATGGTAGACATCTAAGATGCGTTCATAACAGCCCTCACGGAGGAATACTTCCTGATTATGCACCTCATCCTGCAATTGTGCTGAAGATGGAGGATGGGACTGGTTTACTTCTCCCAATCATTGTTTTGGAGATGCCAAGTGTCTTACTAATGGCAGCAGTTCGCAATGTTCAAATAGCTAGACCTACTTTATATCATGCAGTGAAGGACATGATTGACAAGATGGGTTACCAAGTCAGAGCAGTTAGAGTCACTAAGAGAGTTCATGAGGCATATTTTGCTCAGTTATATCTTTCCAAGGTTGGTAATGAGTCAGAATGTATGACCTTTGATCTTCGACCTTCAGATGCTATTAACATTGCAGTGAGATGCAAGGTGCCTATACAAGTTAACAAGTACTTGGCATACAGTGATGGAATGAGAGTAATTGAATCAGGCAAGCTGTCAACACAGTCCCCTGGTTCAGATGGGCTATTATTTACTGAATTGGACCGACCAAGTGGTAAGCCTTGTGTTGAAACTAAGGAATTCAATCTCTTGCACAACATGTTGAAAGCTGTTGTTGAAGAGCGCTATCAAGATGCCGCTTTATGGAGGGACAGACTTAATCAATTTAGGGCTGGGAAAAACATGAATAACAGGTATGAGTATGAAAGGTTATTTCATGCTATGAAGGATCCTCTGGCCACGATGAAAGAAGACAGCATTGAGAATTCAGGGGACGATAGGTGGACAAGAATTGGCAGCTTAAAGAAGAAAGCAGTAACCGCATCCATCAAACTGAGGCATTCTTTTAAGAAGAAAAGAAGCAGAAAAAGTGCCAGTCGGAGCAATTCCCTCTCCTTTGAGGATGTTCGGGATGTTAAGGAGCTTCAAGCAGTCGATGCGCTTCGACAAGCACTTTTGCTGGATAACTTGCTGCCTGCTAGACATGATGATTATCATATGTTATTGAGATTCCTGAAAGCAAGGAAGTTTGATATTGAGAAAGCAAAACACATGTGGGCTAACATGATCCAATGGAGGAAAGACTATGGTACAGATACAATTATAGAGGATTTTGAATTGGAGGAGCTGGATGAAGTCCTGCAGTACTATCCACAAGGGTATCATGGTGTGGATAGGGAAGGAAGGCCTGTTTACATTGAGAGGCTAGGCAAAGTTGACCCAAACAAACTTATGCAAGTAACTAACATTGACAGGTATCTGAGATACCATGTGCAGGGTTTTGAGAAAACATTTGCTGTTAAGTTCCCAGCTTGTTCTGTAGCTGCTAAGAGACACATAGATTCAAGCACTACCATTTTGGATGTCCAAGGCGTGGGCCTCAAAAACCTGACTAAATCTGCACGCGAACTCGTCGTGCGGCTGCAGAAGATTGATGGTGATTACTATCCCGAAACACTCTGCCAAATGTTTATCATCAATGCTGGTCCTGGTTTCAAGATGCTATGGAACACTGTGAAGTCATTCCTTGATCCCAAAACTACTTCAAAAATCCATGTTCTTGGAAGCAATTTCAAGACTAAATTACTTGAAATTATTGAGGCGAGTGAGCTGCCAAAATTCCTAGGTGGAGATTGCACTTGTGAAGATCAGGGTGGTTGTTGTTTGAGGTCTGATAAAGGGCCATGGCAAGACCCAAACATTTTAAAGATGGTTCTCAGTGGTGAAGTGCAATGTTCTAGGCAAACAGTCGATGAGGCGACGGCGATTGAACGTGATAAGACATCTCGTCCAATGATAAGAATTAACGAGACATGTACTGGAGAATCAGTGTCTGAAGCTGAAGATATCACTTCTCCGAAACCAAGTGGCAATTATATGAACCCTACGTTGACTCCTGTCCATGAAGAAGCAAGACTGGTTGAAAAAGATGAGTCTGTTCCCATGGTTGACAAGATCGTGGATGTTAGCTGGAAGGAGAAGCAAGCAACATCTCATAACTCATTTGCCTCAACAGAGAAAGTTGGATTGAGTACTGGAAAATTTCCTGATGGAAAATGTGCATATATCTGGACTTTGATTGCGAGCTTCTTCTTTGCCCTTGTTACTTTTGCTCATTCAATTGCATCTCGTGCCGCTAAAAGAAGAGTAACACCGGACTCTGAACCTGATTCTTGCAAGACACTACTGCCATCTACCTTGGAACGCCTTGGTGAGCTTGAAGAGAAAATTGAAATGCTGCAATCAAAGCCTAATATGATGCCGTATGAGAAAGAAGAACTGCTGAATGCTGCAGTTTATCGTGTTGATGCATTGGAATCAGAGTTGATTGCTACAAAGAAGGCTCTATACGAAGCATTGATAAGACAAGAAGAACTCATGGCATACATGGAAACTCAGGAAAATCGCCAAAACAGGAGAAAGGTTTGCTGCTAA 2727 0.4257 MNKMGSLKGPVILPPVRAKVAGLCSVPMIGPMKISRCIRSEFWGLSGSRAKPSALSCHVNLRKCKRVHCSFNSPSNDSGSMAENFNEKDEDYVNSSVVEAVEVRSGADGFVIKMRDGRHLRCVHNSPHGGILPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYHAVKDMIDKMGYQVRAVRVTKRVHEAYFAQLYLSKVGNESECMTFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTQSPGSDGLLFTELDRPSGKPCVETKEFNLLHNMLKAVVEERYQDAALWRDRLNQFRAGKNMNNRYEYERLFHAMKDPLATMKEDSIENSGDDRWTRIGSLKKKAVTASIKLRHSFKKKRSRKSASRSNSLSFEDVRDVKELQAVDALRQALLLDNLLPARHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKDYGTDTIIEDFELEELDEVLQYYPQGYHGVDREGRPVYIERLGKVDPNKLMQVTNIDRYLRYHVQGFEKTFAVKFPACSVAAKRHIDSSTTILDVQGVGLKNLTKSARELVVRLQKIDGDYYPETLCQMFIINAGPGFKMLWNTVKSFLDPKTTSKIHVLGSNFKTKLLEIIEASELPKFLGGDCTCEDQGGCCLRSDKGPWQDPNILKMVLSGEVQCSRQTVDEATAIERDKTSRPMIRINETCTGESVSEAEDITSPKPSGNYMNPTLTPVHEEARLVEKDESVPMVDKIVDVSWKEKQATSHNSFASTEKVGLSTGKFPDGKCAYIWTLIASFFFALVTFAHSIASRAAKRRVTPDSEPDSCKTLLPSTLERLGELEEKIEMLQSKPNMMPYEKEELLNAAVYRVDALESELIATKKALYEALIRQEELMAYMETQENRQNRRKVCC* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0257 908 Gene3D Bifunctional nuclease domain 128 262 IPR036104 GO:0004518
Aev08g0257 908 SMART CRAL_TRIO_N_2 428 453 IPR011074 -
Aev08g0257 908 Pfam CRAL/TRIO, N-terminal domain 427 452 IPR011074 -
Aev08g0257 908 SMART sec14_4 473 644 IPR001251 -
Aev08g0257 908 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 340 904 - -
Aev08g0257 908 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 340 904 - -
Aev08g0257 908 SUPERFAMILY CRAL/TRIO N-terminal domain 404 469 IPR036273 -
Aev08g0257 908 CDD SEC14 477 641 IPR001251 -
Aev08g0257 908 Pfam CRAL/TRIO domain 479 641 IPR001251 -
Aev08g0257 908 Coils Coil 827 847 - -
Aev08g0257 908 Gene3D - 461 672 IPR036865 -
Aev08g0257 908 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 473 647 IPR001251 -
Aev08g0257 908 Pfam Bifunctional nuclease domain 141 251 IPR003729 GO:0004518
Aev08g0257 908 Gene3D - 377 460 - -
Aev08g0257 908 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 122 257 IPR003729 GO:0004518
Aev08g0257 908 PRINTS Cellular retinaldehyde-binding protein signature 431 453 - -
Aev08g0257 908 PRINTS Cellular retinaldehyde-binding protein signature 600 619 - -
Aev08g0257 908 SUPERFAMILY CRAL/TRIO domain 472 668 IPR036865 -
Aev08g0257 908 SUPERFAMILY Hypothetical protein TM0160 122 260 IPR036104 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0257 Aev-Chr8 1456603 1463292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0257 432 638 Acyl Lipid Metabolism Gene Families AT5G47730 31.100 1.44e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0257 - - dzi:111312741 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0257 08 1456603 1463292 Aev08g0257 08 1456603 1463292 ECH
Aev04g3372 04 32473790 32478750 Aev08g0257 08 1456603 1463292 ECH