Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3372 ATGTGTGACACTATGTCCATTCCTACTTCAGATAGACCTTTTAAACTCGGTGTTGAAATTGAGTATCAACAAGAGGATGAAAATAATAAGAAGATAACAAGGCTAGGGTCATTGAAAAAGGTAGCAATAAGTGCATCTTCAAAGTTTAGGAATTCATTGGCAAAGAAAGGGAGGAGGAACAGCAGGGTTATGTCTGTTATTGAGGATGAACTTGATGCTGAAGACTTGAAAGCTGTTCATCATTTTCGCCAATCTCTCCTTCTTGATGACCTCTTACCCTCTAAACATGATGATCACCATATGATGTTTAGATTCTTGAAAGCAAGAAAGTTTGACATGGAGAAATCAAAACAAATGTGGGCAGAAATGCTTCAATGGAGGAAGGACTTTGGTGCTGACTCTATCATGGAGGATTTTGAGTTCAATGAGAGAGATGAAGTTTTGAAATACTACCCACAAGGGCATCATGGGGTTGATAAAGAAGGAAGACCAGTGTACATAGAAAGGGTGGGTCTAGTTGACTCAAACAAGTTAATGCAAGTTACAACAATGGATCGATATGTGAAGTATCATATTAGAGAGTTTGAGAGAACCTTTGCTGTTAAGTTACCTGCTTGTTCTATCTCTGCAAAGAAGCACATTGACCAAAGCACTACTATCTTGGATGTCCAAGGAGTGGGTCTTAAAAGCATGAATAAATCTGCAAGGGAACTCATCCAGAGGCTTCAGAAGATTGATGGTGAGAATTATCCTGAGACCTTGAATCGGATGTTCATCATCAATGCTGGTTCTGGATTTAGGTTGTTGTGGAACACTGTTAAGTCATTTCTTGATCCCAAGACCACTGCAAAAATCAATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGTACTTGTGCAGATAAAGGTGGGTGTATGCTTTCTGATAAGGGACCATGGAATGACCCTGAAATCTTGAAGATGGTTCAAAATGGTGAGGGAAAATGCAACACCAAAATCTTATCCATGATTGAGGAGAAAACAATAATTGCAGATGAAACAACACACCAAAAGGAATGTGATTCTGTCGAGACTAAAGAGTTAGTTCATGAGAAGACAAAATATTTGTTACCAAAAATGGAGCATCCTGAAGCAAGTGATGCTGAAGGAGATGAAAAAGAATGCAGTGTATATCAGTATGGCAGTAATGTTGTCCCACTGATTGACAAGCATGTTAATAAATCATGGAATGGAGCAGTTCAAAGTGATAAACTTGCACTTTCTGAAGATTGCAAGACTTCTATTGGGATCAGAAATCAAATCTTTGGTGGAATAATGTCTATTTTGATGGGAATTATTACCATGATCCGCATGACAAGTACCATGCCAAGGAAAATCACTGCAGTTGCCACCTATGGCAGCCCAGAATACAACGATGACCGTTCGATGAAAGCACCTAGTGTCTCCATTGATGATCACACGGCCTTGGTTAATCGCATGGCTGAACTAGAAGAGAAGGTCCAAGTTATTAGCATGAGACCTGCTATGCCACCTGAAAAGGAGGAATTGTTGAATCATGCTCTACATAGAGTCAATACCTTGGAACAAGACTTGGCTCTTGCCAAAAAGGCTCTTGATGATGCTTTTTCTAGACAAGTGGAGCTAGAAGACTACATTGACAAGAAGAAGAAGAAATCTATGTTTTACTGGTAA 1740 0.3954 MCDTMSIPTSDRPFKLGVEIEYQQEDENNKKITRLGSLKKVAISASSKFRNSLAKKGRRNSRVMSVIEDELDAEDLKAVHHFRQSLLLDDLLPSKHDDHHMMFRFLKARKFDMEKSKQMWAEMLQWRKDFGADSIMEDFEFNERDEVLKYYPQGHHGVDKEGRPVYIERVGLVDSNKLMQVTTMDRYVKYHIREFERTFAVKLPACSISAKKHIDQSTTILDVQGVGLKSMNKSARELIQRLQKIDGENYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTTAKINVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGEGKCNTKILSMIEEKTIIADETTHQKECDSVETKELVHEKTKYLLPKMEHPEASDAEGDEKECSVYQYGSNVVPLIDKHVNKSWNGAVQSDKLALSEDCKTSIGIRNQIFGGIMSILMGIITMIRMTSTMPRKITAVATYGSPEYNDDRSMKAPSVSIDDHTALVNRMAELEEKVQVISMRPAMPPEKEELLNHALHRVNTLEQDLALAKKALDDAFSRQVELEDYIDKKKKKSMFYW* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3372 579 Pfam CRAL/TRIO, N-terminal domain 95 121 IPR011074 -
Aev04g3372 579 SMART CRAL_TRIO_N_2 98 123 IPR011074 -
Aev04g3372 579 CDD SEC14 145 312 IPR001251 -
Aev04g3372 579 Gene3D - 131 342 IPR036865 -
Aev04g3372 579 Gene3D - 59 130 - -
Aev04g3372 579 SUPERFAMILY CRAL/TRIO N-terminal domain 69 139 IPR036273 -
Aev04g3372 579 Pfam CRAL/TRIO domain 149 311 IPR001251 -
Aev04g3372 579 Coils Coil 533 560 - -
Aev04g3372 579 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 11 575 - -
Aev04g3372 579 Coils Coil 228 248 - -
Aev04g3372 579 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 143 317 IPR001251 -
Aev04g3372 579 SUPERFAMILY CRAL/TRIO domain 144 339 IPR036865 -
Aev04g3372 579 SMART sec14_4 143 314 IPR001251 -
Aev04g3372 579 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 11 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3372 Aev-Chr4 32473790 32478750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3372 104 308 Acyl Lipid Metabolism Gene Families AT5G47730 33.649 4.10e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3372 - - gmx:100802579 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3372 04 32473790 32478750 Aev04g3372 04 32473790 32478750 ECH
Aev04g3372 04 32473790 32478750 Aev08g0257 08 1456603 1463292 ECH