Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2314 ATGGCTAGTGGTGATTCTCCACAAGATATTGCTGATAGGGAAAAAATCTTCAAGAACTTTGATTCAAATGGTGATGGACAAATATCTTCATCAGAGCTTGGGGAAGCATTAAAAACTCTTGGGTGTGTCTCTGTAGAAGAGGTTCAAAGGATGATGGATGAAATTGACACTGATGGAGATGGTTTCATTTCTTATGAAGAATTCACAGAATTTGCTAGGGACAACATTGGATTAGTAAGAGATGTTGCCAAGCTTTTTTAA 261 0.3716 MASGDSPQDIADREKIFKNFDSNGDGQISSSELGEALKTLGCVSVEEVQRMMDEIDTDGDGFISYEEFTEFARDNIGLVRDVAKLF* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2314 86 PANTHER POLCALCIN NIC T 1 5 86 - -
Aev07g2314 86 SMART efh_1 47 75 IPR002048 GO:0005509
Aev07g2314 86 SMART efh_1 12 40 IPR002048 GO:0005509
Aev07g2314 86 ProSiteProfiles EF-hand calcium-binding domain profile. 43 78 IPR002048 GO:0005509
Aev07g2314 86 Gene3D - 2 86 - -
Aev07g2314 86 ProSitePatterns EF-hand calcium-binding domain. 56 68 IPR018247 -
Aev07g2314 86 SUPERFAMILY EF-hand 6 72 IPR011992 -
Aev07g2314 86 PANTHER TROPONIN 5 86 - -
Aev07g2314 86 CDD EFh 14 73 IPR002048 GO:0005509
Aev07g2314 86 Pfam EF-hand domain pair 16 73 IPR002048 GO:0005509
Aev07g2314 86 ProSiteProfiles EF-hand calcium-binding domain profile. 8 42 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2314 Aev-Chr7 23978800 23979060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2314 11 86 EF-hand Containing Proteins AT3G03430 63.158 9.84e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2314 K13448 - sspl:121788808 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0741 03 5723295 5723549 Aev07g2314 07 23978800 23979060 PCT