Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0741 ATGGCTGATGATCCACAAGATGTAGCTGATAGGGAGAAAATTTTCAAGAGATTTGATTCAAATGGTGATGGCCAAATCTCTTCAGCAGAGCTTGGTGAGGCACTTCAATCACTTGGATCAGTGACCCCAGAAGAGGTGCAGAGGATGATGGCAGAGATTGACACAAATGGTGATGGCTTCATCTCATATGAAGAATTCACTGAATTTGCAAGAGCCAACCGTGGCCTAATCAAGGATGTTGCTAAGATCTTTTAA 255 0.4275 MADDPQDVADREKIFKRFDSNGDGQISSAELGEALQSLGSVTPEEVQRMMAEIDTNGDGFISYEEFTEFARANRGLIKDVAKIF* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0741 84 Gene3D - 2 84 - -
Aev03g0741 84 SMART efh_1 10 38 IPR002048 GO:0005509
Aev03g0741 84 SMART efh_1 45 73 IPR002048 GO:0005509
Aev03g0741 84 SUPERFAMILY EF-hand 9 70 IPR011992 -
Aev03g0741 84 ProSitePatterns EF-hand calcium-binding domain. 54 66 IPR018247 -
Aev03g0741 84 PANTHER POLCALCIN NIC T 1 1 84 - -
Aev03g0741 84 PANTHER TROPONIN 1 84 - -
Aev03g0741 84 ProSitePatterns EF-hand calcium-binding domain. 19 31 IPR018247 -
Aev03g0741 84 ProSiteProfiles EF-hand calcium-binding domain profile. 6 41 IPR002048 GO:0005509
Aev03g0741 84 ProSiteProfiles EF-hand calcium-binding domain profile. 44 76 IPR002048 GO:0005509
Aev03g0741 84 CDD EFh 12 71 IPR002048 GO:0005509
Aev03g0741 84 Pfam EF-hand domain pair 14 71 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0741 Aev-Chr3 5723295 5723549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0741 4 84 EF-hand Containing Proteins AT3G03430 67.901 7.83e-39 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0741 K13448 - csv:101214153 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0741 03 5723295 5723549 Aev07g2314 07 23978800 23979060 PCT