Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3251 ATGACAGAAATTGACATGGAAGTTGTTAAACCAGAGATTATGAGGCCCTATGTATGGCTTCAGACGTCTGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTTTTGCCCTCTGATTTGCCAGGAAATAATACAAAAAGGCATGGGATCTTCCAAGAATTCTGCAATATCTCTTCCTCAACGAGTCACTCCTGCTATGTTGAGTTTAATTTTTGATTATTGCCGATTTCATCAAGTGCCAGGTCGCTCAAACAAGGAGCGTAAGTCTTATGAATTGAAATTCATTCGGATGGACACAAAGCAGCTCTGCGAGTTGACATCTGCTGCAGACAGCCTTCAGTTGAAGCCATTGGTTGATCTTACCAGTCGTACACTTGCTCGGATAATTGAAGGAAAATCGCCTGAGGAAATTCGCGAGATATTCAATTTGCCTGATGATCTTACAGAGGAAGAGAAATTGGAGCCCTTGAAAAACACAAGTGCCGACCCTAGAATCAGGCTATTGAATCGTTTGTATGCCAAAAAGAGGAAAGAACTGAAAGAGCGTGAGAGGCTAAAGAATGTTGAAGTTGAAGAAGAGCATGTGGATGAACGTTCAGTTGATGACCTTCTGTCCTTTATTAATGGAAACAACGGAGATCCAAAGGGGATGAAATCTTCTAAGAACAAAAAGAAGAACCGAAGGAAAAAAGATCAACAGAAGAGCTCTTCTTTGAAGGAAGCTTCTGATTTGAATTATAAGGAGGTAAATGGTCATAATATCAGAGTCGAAACTGTTGAAGCTAATAGAACTATCAAGCCCTCACATTCTCATACAGATGACGACACTTTTGTCCATAAAGAGTTTGATGATGGAGATGTAGATGATGAGATTGATCCTGCATTAAGGGAAAAAATCGACAGGGAAGTGGAAGATTTTGCCCGAAGATTAAATTCTGACTGGCCAGAGAGGATGCAAGAGTTTTTATCGTCAGGGCAAGAAAGGAAGACGATGCTTTTTACATCCAATGGGAATAGTTTTCTAAGGCGAAATGCGTGGCCCACACTTCATCCAACGGTGGATGGAGTGTTCATCGACGCGGAGGCCGAGAAAAGTGGAGTTCTAAAAACATCTCTTGTAATTAATACACCACCTTTGACTGGACTAAATGAAAATCTCACAGCAGAACAACAAAAAGAATCAATGGAAATGAATCCTTACAAGCCCCACTCAGCCTATGGCTTGAACAATTTTGAGAGATGCTAA 1251 0.4077 MTEIDMEVVKPEIMRPYVWLQTSDGSIQQVEQEIAMFCPLICQEIIQKGMGSSKNSAISLPQRVTPAMLSLIFDYCRFHQVPGRSNKERKSYELKFIRMDTKQLCELTSAADSLQLKPLVDLTSRTLARIIEGKSPEEIREIFNLPDDLTEEEKLEPLKNTSADPRIRLLNRLYAKKRKELKERERLKNVEVEEEHVDERSVDDLLSFINGNNGDPKGMKSSKNKKKNRRKKDQQKSSSLKEASDLNYKEVNGHNIRVETVEANRTIKPSHSHTDDDTFVHKEFDDGDVDDEIDPALREKIDREVEDFARRLNSDWPERMQEFLSSGQERKTMLFTSNGNSFLRRNAWPTLHPTVDGVFIDAEAEKSGVLKTSLVINTPPLTGLNENLTAEQQKESMEMNPYKPHSAYGLNNFERC* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3251 416 PANTHER SKP1-LIKE PROTEIN 20 1 280 - -
Aev06g3251 416 PANTHER SKP1 1 280 IPR016897 GO:0006511
Aev06g3251 416 SMART skp1_3 15 116 IPR001232 GO:0006511
Aev06g3251 416 MobiDBLite consensus disorder prediction 205 291 - -
Aev06g3251 416 SUPERFAMILY Skp1 dimerisation domain-like 91 160 IPR036296 GO:0006511
Aev06g3251 416 Coils Coil 170 190 - -
Aev06g3251 416 Pfam Skp1 family, dimerisation domain 117 155 IPR016072 GO:0006511
Aev06g3251 416 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Aev06g3251 416 SUPERFAMILY POZ domain 16 80 IPR011333 -
Aev06g3251 416 Gene3D Potassium Channel Kv1.1; Chain A 13 162 IPR011333 -
Aev06g3251 416 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3251 Aev-Chr6 33907482 33911644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3251 - - gmx:100809439 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3251 06 33907482 33911644 Aev06g3251 06 33907482 33911644 ECH
Aev02g0287 02 2109544 2112644 Aev06g3251 06 33907482 33911644 ECH
Aev06g3251 06 33907482 33911644 Aev02g0287 02 2109544 2112644 PCT