Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0287 ATGTCAGAAACTGACTTGACAGTTATTAAACCTGAGATGATGAAGTCATATATCTGGCTTCAGACTAATGATGGTTCTATCCAACAAGTGGAACAAGAAATTGCAATGTTTTGCCCACTGATATGTCAAGAAGTGATACAGAAAGGGATGGGTTCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAGGTCACCCCTTCTACATTGAGCCTGATTCTTGATTATTGTCGGTTTCATCAAGTACCAGGCCGCTCGAACAAGGAACGGAAATCTCATGATGAAAGATTCGTTAAGATGGGCACAAATAGGCTCTGTGAGTTGGTGTCTGCTGCAGACAGCCTTCAGTTAAAGCCGTTGGTTGATCTTATCAGTCGAGCACTTGCGCGAAAGATTGAAGGAAGAACACCAGAGGAGATACGCGAAATATTTCATCTTCCTGATGATCTAACTGAGGAAGAGAAATTGGAGCCCTTGAAAAATATAACTGCTGACCCTAGGATCAGGCTCTTGAATCGTTTATATGCGAAAAAGAGGAAAGAACTAAAAGAGCGTGAAAGGCTAAAGAATGTTGAAGTTGAAGAAGAGCGTGTAGATGAACGATCAGTCGATGATCTTTTGTCTTTTATTAATGGAAGTGATGGAGATCCAAAGGCCGGTAAAACTTCCAAGAATAAAAAGAAGAACCGGAGGAAAAAAGATCAACAAAAGAACTCTTCTTCGAAGGATGCATCTGGACTTAGTAAGAAGGAGTTAAATGGGCATGACACCGAACACCAAAGTTCCGAAGCTAGTAGAATTGGTGAGACATCGAATTTACAATGTACAGAGGGTGATGTTTTTGCATCTAAGGTTGAGTTCGATGATGGAGATACAGATGATGGGATTCCTCCTGCATTAAGGGAAAAACTTGACAGGGAAGTGGAAGATTTTGCTCGCAGATTAGATTCTGATTGGCGAGAATTCTTATCTTCGGGGCGAGAAAGGACAACACCGGCACCGCATCTTAGAACTAACGGGAATGGTTTTCTGAGGCGACATGCATTACGACTAATAGAATTTAGCCGCACAATGGATATCTTGGGTCTTCAATTCCCTATTCTTCTTTTCCTTTAA 1113 0.4133 MSETDLTVIKPEMMKSYIWLQTNDGSIQQVEQEIAMFCPLICQEVIQKGMGSSKNCAICLPQQVTPSTLSLILDYCRFHQVPGRSNKERKSHDERFVKMGTNRLCELVSAADSLQLKPLVDLISRALARKIEGRTPEEIREIFHLPDDLTEEEKLEPLKNITADPRIRLLNRLYAKKRKELKERERLKNVEVEEERVDERSVDDLLSFINGSDGDPKAGKTSKNKKKNRRKKDQQKNSSSKDASGLSKKELNGHDTEHQSSEASRIGETSNLQCTEGDVFASKVEFDDGDTDDGIPPALREKLDREVEDFARRLDSDWREFLSSGRERTTPAPHLRTNGNGFLRRHALRLIEFSRTMDILGLQFPILLFL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0287 370 PANTHER SKP1-LIKE PROTEIN 20 1 280 - -
Aev02g0287 370 MobiDBLite consensus disorder prediction 247 262 - -
Aev02g0287 370 SUPERFAMILY POZ domain 16 80 IPR011333 -
Aev02g0287 370 Coils Coil 170 190 - -
Aev02g0287 370 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Aev02g0287 370 SUPERFAMILY Skp1 dimerisation domain-like 91 160 IPR036296 GO:0006511
Aev02g0287 370 MobiDBLite consensus disorder prediction 207 272 - -
Aev02g0287 370 PANTHER SKP1 1 280 IPR016897 GO:0006511
Aev02g0287 370 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Aev02g0287 370 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Aev02g0287 370 SMART skp1_3 15 116 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0287 Aev-Chr2 2109544 2112644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0287 - - gmx:100794666 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0287 02 2109544 2112644 Aev02g0287 02 2109544 2112644 ECH
Aev02g0287 02 2109544 2112644 Aev06g3251 06 33907482 33911644 ECH
Aev06g3251 06 33907482 33911644 Aev02g0287 02 2109544 2112644 PCT