Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3215 ATGGCAGAGGAAAAACCACAAAGGTATGGTGTTGTTACAGGGGCAAACAAAGGGATAGGATTTGAGACAGTTAAAGAATTGGCCTCAAATGGAATCAAGGTGGTTCTCACAGCCAGAGATGAGAAAAGGGGCAATGAATCCATTGAGAAATTGTTGAAGGAATGTGGTTTATCTGATCTTGTGCTTTTTCACCAGCTTGATGTCACTGATCATGCTAGTATTGCTTCTTTAGCAGATTTTGTTAAGACCCACTTTGGAAGACTTGATATCTTGGTGAACAATGCAGGAATCAGTGGTGTTGATCCTAGTGAAAAGGTAAGTCCAACAGAAGTTAAGTGGGAGGAACTGAATCAAACTTATGAGATGGCTGAAAAGTGCATATTGACAAACTACTATGGTGCTAAGGAAATAACTGAAGCATTTCTTCCCCTTCTCAAGTTATCCAATTCACCTAAAATTGTTAATGTTTCCTCTCAAGCAGGGCTATTAAAGAAAATATCAAATGAATGGGCTAAAGGGGTGCTTGATGATATCGAAAACCTTACAGAAGAGAAAATAGATGAAGTAGTGAAGGAGTTTCTGAAGGACTTCAAAGAAGGTTCAGTAGAAAGCAAAGGGTGGCCAACAATATTGTCTGCATATAGAGTCTCAAAAGCAGCAATGAACTCTTACACAAGACTTCTTGCAAAGAAGCACCCAAATTTCTGCATTAATTGTCTGTGTCCTGGTTATGTCAAAACAGACATAAACTTGAACACTGGAAACTTATCTGTTAGTGAAGGTGCTGAAAGTGTTGTGAGATTAGCACTTCTACCTGATGGTTCCCCTTCTGGCCTCTTCTATGTTAGGCAACAAGTTTCTGAATTTTGA 870 0.3908 MAEEKPQRYGVVTGANKGIGFETVKELASNGIKVVLTARDEKRGNESIEKLLKECGLSDLVLFHQLDVTDHASIASLADFVKTHFGRLDILVNNAGISGVDPSEKVSPTEVKWEELNQTYEMAEKCILTNYYGAKEITEAFLPLLKLSNSPKIVNVSSQAGLLKKISNEWAKGVLDDIENLTEEKIDEVVKEFLKDFKEGSVESKGWPTILSAYRVSKAAMNSYTRLLAKKHPNFCINCLCPGYVKTDINLNTGNLSVSEGAESVVRLALLPDGSPSGLFYVRQQVSEF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3215 289 Gene3D - 3 289 - -
Aev06g3215 289 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 5 289 - -
Aev06g3215 289 CDD carb_red_PTCR-like_SDR_c 8 289 IPR045313 GO:0016616
Aev06g3215 289 Pfam short chain dehydrogenase 11 164 IPR002347 -
Aev06g3215 289 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 5 289 - -
Aev06g3215 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 275 IPR036291 -
Aev06g3215 289 PRINTS Glucose/ribitol dehydrogenase family signature 145 161 IPR002347 -
Aev06g3215 289 PRINTS Glucose/ribitol dehydrogenase family signature 9 26 IPR002347 -
Aev06g3215 289 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Aev06g3215 289 PRINTS Glucose/ribitol dehydrogenase family signature 86 97 IPR002347 -
Aev06g3215 289 PRINTS Glucose/ribitol dehydrogenase family signature 214 233 IPR002347 -
Aev06g3215 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 214 233 IPR002347 -
Aev06g3215 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 IPR002347 -
Aev06g3215 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3215 Aev-Chr6 33602795 33616480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3215 11 250 Miscellaneous Gene Families AT2G29150 29.508 1.88e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3215 K15095 - vun:114183121 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3215 06 33602795 33616480 Aev06g3215 06 33602795 33616480 ECH
Aev06g3215 06 33602795 33616480 Aev02g0330 02 2415142 2417064 PCT
Aev02g0331 02 2427648 2429092 Aev06g3215 06 33602795 33616480 PCT