Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0330 ATGGAAGAATCTCCAAAAAGGTATGCAGTAGTGACTGGAGCAAACAAAGGGATTGGATTGGAGATAGTGAAGCAATTGGCTTCAAATGGGATTCACAAGGTGGTTCTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCATTGCAAACACTCATAGATTCTGGCATTTCTCATGAACTTGTTCTGTTTCATCAGCTAGATGTTGCTGATCCTATAAGTGTTGCTTCTCTTGCTGATTTCCTCAGATCCAAATTTGGGAAACTTGATATTCTGATTAACAATGCAGGGACTCTTGGGATTATGGCTAAAGACAATGATTTAATCCCTTCAGCAATAATGAAACGTGGGGCAATATCTGATGATGAAATGGAAAGAATAATCCAAACACATGAACTAGGTGAAGAATGCTTGCAAATAAATTACTATGGTGCTAAAAGAACAATTGAATCTCTTATGCCTCTGCTTCAGTTATCTGATTCACCAAGAATTGTTAATGTTTCATCCTCCTTGGGGAAGTTAGAGAATATACCAAATGAATGGGCTAAAGGGGTGTTAAGTGATGCTGATAACCTAACAGAAAAGAGAGTGGATGAAGTTTTGAATCAGTTTCTGAAAGATTTCAAAGAAGGCTCATTGGAAAGCAAAGGGTGGCCTAAGGGTCTTAGTGCATATATTCTCTCTAAAGCTGCTATGAATGCATACACAAGAGTTCTTGCTAAGAAGTACCCTAATTTCTGCATCAATAGTGTTTGCCCTGGTTATGTTAAGACTGATATAACCGGAAATACCGGCTTCTTAACCGTCGACGAAGGCGCTGCTAGTCCTGTGAGACTAGCTCTGCTTTCAAATGGTAGTCCTTCTGGCCTCTTCTATTATAGGACTGAAGAATCTTCCTTTTGA 900 0.3944 MEESPKRYAVVTGANKGIGLEIVKQLASNGIHKVVLTSRDEKRGLHALQTLIDSGISHELVLFHQLDVADPISVASLADFLRSKFGKLDILINNAGTLGIMAKDNDLIPSAIMKRGAISDDEMERIIQTHELGEECLQINYYGAKRTIESLMPLLQLSDSPRIVNVSSSLGKLENIPNEWAKGVLSDADNLTEKRVDEVLNQFLKDFKEGSLESKGWPKGLSAYILSKAAMNAYTRVLAKKYPNFCINSVCPGYVKTDITGNTGFLTVDEGAASPVRLALLSNGSPSGLFYYRTEESSF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0330 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Aev02g0330 299 CDD carb_red_PTCR-like_SDR_c 7 293 IPR045313 GO:0016616
Aev02g0330 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 299 - -
Aev02g0330 299 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Aev02g0330 299 PRINTS Glucose/ribitol dehydrogenase family signature 86 97 IPR002347 -
Aev02g0330 299 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Aev02g0330 299 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Aev02g0330 299 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Aev02g0330 299 Pfam short chain dehydrogenase 8 174 IPR002347 -
Aev02g0330 299 Gene3D - 2 299 - -
Aev02g0330 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 IPR002347 -
Aev02g0330 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Aev02g0330 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Aev02g0330 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0330 Aev-Chr2 2415142 2417064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0330 3 264 Acyl Lipid Metabolism Gene Families AT1G24360 21.591 4.11e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0330 K15095 - gmx:100801677 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0330 02 2415142 2417064 Aev02g0330 02 2415142 2417064 ECH
Aev06g3215 06 33602795 33616480 Aev02g0330 02 2415142 2417064 PCT