Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3027 ATGGTTGCAGTAGCAGCTGAAGCAGTAATGTCTCTTCAACCACCAACAGACATCAATTCTTTGACTCTTCCTTCTAGAAGGTTGGAAGGCAAAATTGCAATTGTAACAGGGGGAGCCAGAGGAATTGGTGAAGCAGCAGTGAGAGTATTTGTGAAGCATGGAGCAAAGGTGGTGATTGGAGACATTGAAGACTCACTAGGAACCATTCTTGCAGAGACACTATCTCCTTCAGCAACCTACATCCACTGTGATGTCAGCAATGAACAAGAAGTAGAAAATTTGGTAAATTTCACAGTTTCACACTATGGACACCTTGACATAATGTTCAACAATGCTGGTGTACTAGGAAACCAGAACAAGAGCAAGAGCATCCTCAATTTCGACCCGAATGAATTCGACATGATCATGAGTGTGAATGTCAAGGGTGTTGCATTAGGTACAAAATATGCAGCTAAGGCTATGATTCCAAGAGGGATTGGTGGTTGCATTATCAATACTGCTAGTGTTGCTAGTGTAATTGGGGGCCTTGGTCCACATTCTTACACAGCTTCAAAGCATGCAATTGTTGGGATCACAAAGAACACTGCTTGTGAATTGGGGAGGTATGGGATAAGGGTGAACTCAATTTCACCATTTGGGGTTGCAACATCAATGCTTGTTAATGCATGGAGGCCAAATAATAGTGGTGATGATGATGAGGGAAGAATGATCAATTTTGGGTTGCCTTTTGATGAGGAAGTTGAGAAGATGGAGGAGTTTGTTAGAGGGCTTGGGAATTTAAGAGGGGTGACTTTGAGGCCTAAGGATATTGCTGAGGCTGCACTTTATCTTGCTAGTGATGAGTCTATGTATGTTAGTGGTCATAATCTTGTTGTGGATGGTGGAATCACTTCCTCAAGAAATTGTGTTGGCCTCTAA 918 0.4248 MVAVAAEAVMSLQPPTDINSLTLPSRRLEGKIAIVTGGARGIGEAAVRVFVKHGAKVVIGDIEDSLGTILAETLSPSATYIHCDVSNEQEVENLVNFTVSHYGHLDIMFNNAGVLGNQNKSKSILNFDPNEFDMIMSVNVKGVALGTKYAAKAMIPRGIGGCIINTASVASVIGGLGPHSYTASKHAIVGITKNTACELGRYGIRVNSISPFGVATSMLVNAWRPNNSGDDDEGRMINFGLPFDEEVEKMEEFVRGLGNLRGVTLRPKDIAEAALYLASDESMYVSGHNLVVDGGITSSRNCVGL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3027 305 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 18 305 - -
Aev06g3027 305 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Aev06g3027 305 PRINTS Glucose/ribitol dehydrogenase family signature 103 114 IPR002347 -
Aev06g3027 305 PRINTS Glucose/ribitol dehydrogenase family signature 202 219 IPR002347 -
Aev06g3027 305 PRINTS Glucose/ribitol dehydrogenase family signature 260 280 IPR002347 -
Aev06g3027 305 PRINTS Glucose/ribitol dehydrogenase family signature 32 49 IPR002347 -
Aev06g3027 305 PRINTS Glucose/ribitol dehydrogenase family signature 181 200 IPR002347 -
Aev06g3027 305 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 297 IPR036291 -
Aev06g3027 305 Gene3D - 18 303 - -
Aev06g3027 305 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 18 305 - -
Aev06g3027 305 CDD secoisolariciresinol-DH_like_SDR_c 27 297 IPR045309 GO:0016616
Aev06g3027 305 Pfam Enoyl-(Acyl carrier protein) reductase 248 297 - -
Aev06g3027 305 Pfam Enoyl-(Acyl carrier protein) reductase 37 224 - -
Aev06g3027 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 IPR002347 -
Aev06g3027 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 103 114 IPR002347 -
Aev06g3027 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3027 Aev-Chr6 31829292 31831179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3027 24 297 Acyl Lipid Metabolism Gene Families AT1G63380 30.742 7.60e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3027 - - gmx:100775210 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3027 06 31829292 31831179 Aev06g3027 06 31829292 31831179 ECH
Aev02g1923 02 21071872 21073589 Aev06g3027 06 31829292 31831179 PCT